Protein–RNA interactions for Protein: Q9Y3E7

CHMP3, Charged multivesicular body protein 3, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3Q9Y3E7 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 MTND4P14-201ENST00000435799 1354 ntBASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 MAPK10-338ENST00000641647 3362 ntBASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 AC093775.1-201ENST00000624154 1868 ntBASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 RNU6-1252P-201ENST00000363054 104 ntBASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 MIR558-201ENST00000384920 94 ntBASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 PSMA6P3-201ENST00000428242 164 ntBASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 RPS29P9-201ENST00000440360 171 ntBASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 AC104308.1-201ENST00000454621 333 ntBASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 snoU13.8-201ENST00000458890 104 ntBASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 RPL21P6-201ENST00000479171 504 ntBASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 AC109635.4-202ENST00000531666 412 ntBASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 AL359219.2-201ENST00000555184 348 ntBASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 MIR4504-201ENST00000577413 92 ntBASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 MIR5583-1-201ENST00000580941 59 ntBASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 PRPF19P1-201ENST00000584766 898 ntBASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 AL355598.1-201ENST00000604169 202 ntBASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 AL022099.1-201ENST00000604551 712 ntBASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 AP000654.2-201ENST00000605633 586 ntBASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 MIR6820-201ENST00000611508 62 ntBASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 AP001350.1-201ENST00000601906 1524 ntBASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 XPOTP1-201ENST00000443317 2398 ntBASIC6.2□□□□□ -1.42
CHMP3Q9Y3E7 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 Y_RNA.28-201ENST00000362554 111 ntBASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 Y_RNA.187-201ENST00000363918 113 ntBASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 Y_RNA.378-201ENST00000365652 113 ntBASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 RNU6-1029P-201ENST00000384109 107 ntBASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 Y_RNA.530-201ENST00000384587 101 ntBASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 UBE2V1P2-201ENST00000397758 440 ntBASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 AL121834.1-202ENST00000404494 277 ntBASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 RN7SKP216-201ENST00000411050 312 ntBASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 AC093414.1-201ENST00000434712 514 ntBASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 AL137792.2-201ENST00000443484 235 ntBASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 ARL2BPP10-201ENST00000446487 531 ntBASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 AC010733.1-201ENST00000451515 401 ntBASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 AC002553.2-201ENST00000453217 340 ntBASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 AL691482.1-201ENST00000453255 87 ntBASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 AC087879.1-201ENST00000474343 374 ntBASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 AC007686.1-201ENST00000488511 463 ntBASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 AL049874.2-201ENST00000492636 288 ntBASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 AC093767.1-201ENST00000504523 156 ntBASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 AL671862.1-201ENST00000515851 349 ntBASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 RNA5SP228-201ENST00000516232 133 ntBASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 AC027369.5-201ENST00000533838 755 ntBASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 MIR4775-201ENST00000581168 75 ntBASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 AL512782.1-201ENST00000603093 364 ntBASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 AC008782.1-201ENST00000603386 430 ntBASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 AL670379.11-201ENST00000604059 253 ntBASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 AL670379.10-201ENST00000604330 253 ntBASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 AC007938.3-201ENST00000604965 623 ntBASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 AL670379.12-201ENST00000605291 253 ntBASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 AL670379.9-201ENST00000605428 253 ntBASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 AC245517.5-201ENST00000611529 162 ntBASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 AC087588.2-201ENST00000617667 426 ntBASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
CHMP3Q9Y3E7 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms