Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 HSPE1P8-201ENST00000406997 288 ntBASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 RHEBP3-201ENST00000411920 351 ntBASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 TPMTP2-201ENST00000414372 726 ntBASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 AC083875.1-201ENST00000419509 405 ntBASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 RSU1P2-202ENST00000437884 485 ntBASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 AC092641.1-201ENST00000440229 772 ntBASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 MTND5P14-201ENST00000441481 1267 ntBASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 GDI2P2-201ENST00000445131 608 ntBASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 RPS11P1-201ENST00000451072 473 ntBASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 AC098824.1-201ENST00000453565 980 ntBASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 TRBV12-2-201ENST00000489763 344 ntBASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 MTND1P5-201ENST00000517906 940 ntBASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 OR6C73P-201ENST00000546432 358 ntBASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 AC090877.1-201ENST00000561418 344 ntBASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 AC023575.1-201ENST00000580510 358 ntBASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 AC083760.1-201ENST00000589621 670 ntBASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 AC079089.3-201ENST00000603094 673 ntBASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 AC097468.3-201ENST00000607956 456 ntBASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 AC087241.4-201ENST00000612441 480 ntBASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 FAM157B-203ENST00000639350 358 ntBASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 AC011978.2-201ENST00000569835 2054 ntBASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
MRPS28Q9Y2Q9 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 AL021368.2-201ENST00000606125 5352 ntBASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 RPL32P3-201ENST00000359025 275 ntBASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 Y_RNA.3-201ENST00000362331 103 ntBASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 SNORA31-201ENST00000362607 130 ntBASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 SNORA70.2-201ENST00000364506 135 ntBASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 RNU6-297P-201ENST00000384636 107 ntBASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 MTCYBP36-201ENST00000404146 440 ntBASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 RN7SKP266-201ENST00000410232 287 ntBASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 RN7SKP33-201ENST00000410942 340 ntBASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 AC007899.1-201ENST00000412776 775 ntBASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 AF274854.1-201ENST00000413236 615 ntBASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 RPS15AP40-201ENST00000419621 391 ntBASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 AL389915.1-201ENST00000422463 466 ntBASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 RPS27AP14-201ENST00000422868 454 ntBASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 RPS3AP44-201ENST00000425466 790 ntBASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 AC096632.1-201ENST00000427395 310 ntBASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 ARPC3P5-201ENST00000448802 534 ntBASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 TRBV26-201ENST00000456572 344 ntBASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 AP000797.1-201ENST00000478870 387 ntBASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 PPIAP15-201ENST00000479662 484 ntBASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 AC091167.1-201ENST00000492017 396 ntBASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 AC090453.1-201ENST00000495560 436 ntBASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 RPL37P25-201ENST00000507308 276 ntBASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.34□□□□□ -1.87
MRPS28Q9Y2Q9 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms