Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.79□□□□□ -1.64
USP25Q9UHP3 AC092325.1-201ENST00000566449 554 ntBASIC4.79□□□□□ -1.64
USP25Q9UHP3 AC005255.1-201ENST00000593748 216 ntBASIC4.79□□□□□ -1.64
USP25Q9UHP3 RPL12P25-202ENST00000598100 674 ntBASIC4.79□□□□□ -1.64
USP25Q9UHP3 AC090948.1-201ENST00000607464 549 ntBASIC4.79□□□□□ -1.64
USP25Q9UHP3 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USP25Q9UHP3 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.79□□□□□ -1.64
USP25Q9UHP3 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USP25Q9UHP3 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
USP25Q9UHP3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USP25Q9UHP3 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP25Q9UHP3 BDP1P-201ENST00000582658 1990 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
USP25Q9UHP3 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
USP25Q9UHP3 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
USP25Q9UHP3 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP25Q9UHP3 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
USP25Q9UHP3 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.78□□□□□ -1.64
USP25Q9UHP3 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
USP25Q9UHP3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
USP25Q9UHP3 XIAPP3-201ENST00000312918 795 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 RNU6-28P-201ENST00000362378 107 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP25Q9UHP3 SNORD51-201ENST00000384320 80 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 RNU6-297P-201ENST00000384636 107 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 MIR192-201ENST00000384915 110 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 MIR141-201ENST00000384975 95 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 MIR181A1-201ENST00000385026 110 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.78□□□□□ -1.64
USP25Q9UHP3 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.78□□□□□ -1.64
USP25Q9UHP3 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.78□□□□□ -1.64
USP25Q9UHP3 Z97055.1-201ENST00000419730 712 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 AC244098.2-201ENST00000422068 99 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.78□□□□□ -1.64
USP25Q9UHP3 AC007742.1-201ENST00000425789 329 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 ELOCP26-201ENST00000436067 329 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 SDCBPP1-201ENST00000440192 890 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 AL022238.1-201ENST00000442557 355 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 PAXBP1P1-201ENST00000449315 447 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 AC009220.1-201ENST00000451614 275 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 RN7SL738P-201ENST00000470264 297 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.78□□□□□ -1.64
USP25Q9UHP3 LARP1BP2-201ENST00000486594 519 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.78□□□□□ -1.64
USP25Q9UHP3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.78□□□□□ -1.64
USP25Q9UHP3 AC021678.1-201ENST00000505195 936 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 AC006390.1-201ENST00000508068 283 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 AC091133.4-201ENST00000511142 308 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
USP25Q9UHP3 RN7SKP92-201ENST00000517266 244 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 COX6CP8-201ENST00000522620 226 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 AP002748.2-201ENST00000528671 348 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.78□□□□□ -1.64
USP25Q9UHP3 DEFB108A-201ENST00000530110 222 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.78□□□□□ -1.64
USP25Q9UHP3 AC068587.4-201ENST00000533893 186 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 AC063950.1-201ENST00000552036 308 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.78□□□□□ -1.64
USP25Q9UHP3 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.78□□□□□ -1.64
USP25Q9UHP3 AP005205.1-201ENST00000563503 508 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.78□□□□□ -1.64
USP25Q9UHP3 BBIP1P1-201ENST00000602999 279 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 RN7SL722P-201ENST00000617780 284 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 RN7SL565P-201ENST00000618246 284 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 OR5AK4P-201ENST00000635912 903 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 AC008013.2-202ENST00000637965 364 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 AC099654.13-201ENST00000639774 207 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
USP25Q9UHP3 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.78□□□□□ -1.64
USP25Q9UHP3 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
USP25Q9UHP3 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP25Q9UHP3 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
USP25Q9UHP3 MFSD8-216ENST00000641147 4009 ntBASIC4.77□□□□□ -1.65
USP25Q9UHP3 AC010300.1-201ENST00000600671 5134 ntBASIC4.77□□□□□ -1.65
USP25Q9UHP3 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
USP25Q9UHP3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP25Q9UHP3 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP25Q9UHP3 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.77□□□□□ -1.65
USP25Q9UHP3 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.77□□□□□ -1.65
USP25Q9UHP3 RNA5SP258-201ENST00000362750 119 ntBASIC4.77□□□□□ -1.65
USP25Q9UHP3 RN7SKP226-201ENST00000364912 300 ntBASIC4.77□□□□□ -1.65
USP25Q9UHP3 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.77□□□□□ -1.65
USP25Q9UHP3 RPL17P50-201ENST00000396131 546 ntBASIC4.77□□□□□ -1.65
USP25Q9UHP3 AC025750.1-201ENST00000399891 379 ntBASIC4.77□□□□□ -1.65
USP25Q9UHP3 RAB28P1-201ENST00000411517 641 ntBASIC4.77□□□□□ -1.65
USP25Q9UHP3 AC109780.2-201ENST00000413467 845 ntBASIC4.77□□□□□ -1.65
USP25Q9UHP3 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.77□□□□□ -1.65
USP25Q9UHP3 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.77□□□□□ -1.65
USP25Q9UHP3 MTND1P2-201ENST00000430604 821 ntBASIC4.77□□□□□ -1.65
USP25Q9UHP3 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.77□□□□□ -1.65
USP25Q9UHP3 AC122718.1-201ENST00000439448 744 ntBASIC4.77□□□□□ -1.65
USP25Q9UHP3 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.77□□□□□ -1.65
USP25Q9UHP3 Z95327.1-201ENST00000446082 482 ntBASIC4.77□□□□□ -1.65
USP25Q9UHP3 PHBP16-201ENST00000446318 950 ntBASIC4.77□□□□□ -1.65
USP25Q9UHP3 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.77□□□□□ -1.65
USP25Q9UHP3 PDSS1P2-201ENST00000449397 678 ntBASIC4.77□□□□□ -1.65
USP25Q9UHP3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.77□□□□□ -1.65
USP25Q9UHP3 HMGB1P15-201ENST00000453854 435 ntBASIC4.77□□□□□ -1.65
USP25Q9UHP3 BX322784.1-201ENST00000455793 1077 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms