Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 AC107954.1-201ENST00000565906 727 ntBASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 PRELID3BP8-201ENST00000604148 295 ntBASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 AL451064.1-201ENST00000607718 471 ntBASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 AL590282.1-201ENST00000610379 1136 ntBASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 ZNF734P-201ENST00000419494 1534 ntBASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 MTND4P9-201ENST00000507819 1346 ntBASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 DBF4P1-201ENST00000412976 1892 ntBASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 RPL23AP57-201ENST00000332361 466 ntBASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 RNU6-374P-201ENST00000364146 108 ntBASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 AL035405.1-201ENST00000400795 710 ntBASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 AL139098.1-201ENST00000407291 389 ntBASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 NDUFB4P5-201ENST00000415445 361 ntBASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 AC027644.1-201ENST00000419595 298 ntBASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 AL606517.1-201ENST00000446914 387 ntBASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 Z99127.3-201ENST00000448158 395 ntBASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 snoU13.3-201ENST00000459441 104 ntBASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 AC011352.3-201ENST00000505162 593 ntBASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 NAMPTP2-201ENST00000505629 1115 ntBASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 AC008885.1-201ENST00000514930 301 ntBASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 AC112198.4-201ENST00000515450 351 ntBASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 AP000790.1-201ENST00000528891 737 ntBASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 AP003066.2-201ENST00000529375 555 ntBASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 AL121603.1-201ENST00000553815 142 ntBASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 DNAJC19P3-201ENST00000594491 331 ntBASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 VN1R87P-201ENST00000596706 487 ntBASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 BNIP3P31-201ENST00000604515 566 ntBASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 AC091903.1-201ENST00000624322 454 ntBASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 AP003485.1-201ENST00000625093 753 ntBASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 AC139713.2-210ENST00000641741 992 ntBASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 OR5BR1P-201ENST00000524992 1330 ntBASIC3.69□□□□□ -1.82
CLIP2Q9UDT6 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 AC010733.2-201ENST00000589496 5702 ntBASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 RNU6-236P-201ENST00000363886 106 ntBASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 RNU6-115P-201ENST00000364310 107 ntBASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 DYNLT3P1-201ENST00000378574 347 ntBASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 RNU6-575P-201ENST00000411326 105 ntBASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 OR4K6P-201ENST00000416478 897 ntBASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 ARF4P4-201ENST00000439608 520 ntBASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 HSPE1P28-201ENST00000443139 211 ntBASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 OFD1P3Y-201ENST00000453312 783 ntBASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 AC104308.1-201ENST00000454621 333 ntBASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 GAPDHP39-201ENST00000481866 979 ntBASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 GMPSP1-201ENST00000514075 579 ntBASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 ARL2BPP5-201ENST00000523141 481 ntBASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 AC087894.1-201ENST00000538359 518 ntBASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 CYB5AP5-201ENST00000549779 389 ntBASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 ZNF971P-201ENST00000562068 1249 ntBASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 AC113368.1-201ENST00000603736 382 ntBASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 AL049777.1-201ENST00000622740 518 ntBASIC3.68□□□□□ -1.82
CLIP2Q9UDT6 AC099506.2-201ENST00000623074 221 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 151.2 ms