Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 AC012182.1-201ENST00000570133 895 ntBASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 MIR1254-2-201ENST00000579553 63 ntBASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 AC060771.1-201ENST00000582031 164 ntBASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 MIR5684-201ENST00000585074 65 ntBASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 AC020914.4-201ENST00000597690 277 ntBASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 AC067959.1-201ENST00000604334 379 ntBASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 AC080013.6-201ENST00000606185 215 ntBASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 AC135507.1-201ENST00000607214 561 ntBASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 AC239868.4-201ENST00000608318 671 ntBASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 MIR7702-201ENST00000621931 59 ntBASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 AC025048.6-202ENST00000627667 438 ntBASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 MAPK10-253ENST00000641010 4072 ntBASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HCN3Q9P1Z3 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 AP001350.1-201ENST00000601906 1524 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 RNU6-1155P-201ENST00000363554 107 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 SNORA7.2-201ENST00000364446 145 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 RNA5SP189-201ENST00000364920 115 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 AL603766.1-201ENST00000407763 664 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 RNU4-6P-201ENST00000410804 122 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 Z97055.1-201ENST00000419730 712 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 AC099677.1-201ENST00000420575 175 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 AC109583.1-201ENST00000432156 268 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 MTCO2P16-201ENST00000436962 677 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 SKP1P1-201ENST00000438081 489 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 RPL22P17-201ENST00000438729 315 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 COX6CP2-201ENST00000444980 225 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 AP000936.2-201ENST00000447151 681 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 AC239367.2-201ENST00000447309 705 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 AL162151.2-201ENST00000448875 158 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 AC073387.1-201ENST00000453261 709 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 SNRPGP5-201ENST00000456003 220 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 SNORD121B-201ENST00000458838 81 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 snoU13.24-201ENST00000458998 104 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 RPL23AP55-201ENST00000498163 452 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 MLLT10P2-201ENST00000506434 249 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 SLC25A15P5-201ENST00000508033 253 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 MTCO3P28-201ENST00000513351 515 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 RN7SKP21-201ENST00000516503 220 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 AC103783.1-201ENST00000520506 373 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 AP003497.1-201ENST00000528472 562 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 AP004242.1-201ENST00000533701 349 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 AC018630.1-201ENST00000541376 925 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 NBR2-204ENST00000587322 63 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 AC012065.4-201ENST00000602445 679 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 AC006254.3-201ENST00000603353 884 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 AL139286.1-201ENST00000604465 483 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 AC068276.1-201ENST00000605793 379 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 AC009090.3-201ENST00000616553 565 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 AC079597.1-201ENST00000624306 508 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 AL133412.1-201ENST00000380194 2992 ntBASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
HCN3Q9P1Z3 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HCN3Q9P1Z3 RNU6-1078P-201ENST00000364522 103 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms