Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RN7SKP125-201ENST00000410481 302 ntBASIC5.15□□□□□ -1.59
SSU72Q9NP77 RNA5SP107-201ENST00000411358 122 ntBASIC5.15□□□□□ -1.59
SSU72Q9NP77 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.15□□□□□ -1.59
SSU72Q9NP77 MTCYBP10-201ENST00000424905 650 ntBASIC5.15□□□□□ -1.59
SSU72Q9NP77 AC093106.2-201ENST00000428212 385 ntBASIC5.15□□□□□ -1.59
SSU72Q9NP77 AC092162.1-201ENST00000432828 434 ntBASIC5.15□□□□□ -1.59
SSU72Q9NP77 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.15□□□□□ -1.59
SSU72Q9NP77 AC010733.1-201ENST00000451515 401 ntBASIC5.15□□□□□ -1.59
SSU72Q9NP77 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.15□□□□□ -1.59
SSU72Q9NP77 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.15□□□□□ -1.59
SSU72Q9NP77 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.15□□□□□ -1.59
SSU72Q9NP77 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
SSU72Q9NP77 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.15□□□□□ -1.59
SSU72Q9NP77 AC097473.1-201ENST00000508142 408 ntBASIC5.15□□□□□ -1.59
SSU72Q9NP77 AC008526.1-201ENST00000509149 338 ntBASIC5.15□□□□□ -1.59
SSU72Q9NP77 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC5.15□□□□□ -1.59
SSU72Q9NP77 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.15□□□□□ -1.59
SSU72Q9NP77 AL358913.1-201ENST00000554342 121 ntBASIC5.15□□□□□ -1.59
SSU72Q9NP77 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SSU72Q9NP77 NDUFB4P11-201ENST00000560510 395 ntBASIC5.15□□□□□ -1.59
SSU72Q9NP77 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.15□□□□□ -1.59
SSU72Q9NP77 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.15□□□□□ -1.59
SSU72Q9NP77 MIR5010-201ENST00000582846 120 ntBASIC5.15□□□□□ -1.59
SSU72Q9NP77 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
SSU72Q9NP77 AC025588.3-201ENST00000604182 274 ntBASIC5.15□□□□□ -1.59
SSU72Q9NP77 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.15□□□□□ -1.59
SSU72Q9NP77 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.15□□□□□ -1.59
SSU72Q9NP77 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.15□□□□□ -1.59
SSU72Q9NP77 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
SSU72Q9NP77 AC011978.2-201ENST00000569835 2054 ntBASIC5.15□□□□□ -1.59
SSU72Q9NP77 KPNA2P1-201ENST00000458289 1591 ntBASIC5.15□□□□□ -1.59
SSU72Q9NP77 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.15□□□□□ -1.59
SSU72Q9NP77 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
SSU72Q9NP77 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.15□□□□□ -1.59
SSU72Q9NP77 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.15□□□□□ -1.59
SSU72Q9NP77 AC010329.2-201ENST00000595195 2737 ntBASIC5.15□□□□□ -1.59
SSU72Q9NP77 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SSU72Q9NP77 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.59
SSU72Q9NP77 OR13C1P-202ENST00000641378 2919 ntBASIC5.14□□□□□ -1.59
SSU72Q9NP77 AC097063.1-201ENST00000426714 1797 ntBASIC5.14□□□□□ -1.59
SSU72Q9NP77 PNPT1P2-201ENST00000456768 2050 ntBASIC5.14□□□□□ -1.59
SSU72Q9NP77 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.14□□□□□ -1.59
SSU72Q9NP77 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SSU72Q9NP77 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSU72Q9NP77 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SSU72Q9NP77 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
SSU72Q9NP77 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SSU72Q9NP77 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSU72Q9NP77 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC5.14□□□□□ -1.59
SSU72Q9NP77 RNU6-960P-201ENST00000364056 120 ntBASIC5.14□□□□□ -1.59
SSU72Q9NP77 RNA5SP232-201ENST00000364144 119 ntBASIC5.14□□□□□ -1.59
SSU72Q9NP77 Y_RNA.252-201ENST00000364556 101 ntBASIC5.14□□□□□ -1.59
SSU72Q9NP77 RNU6-890P-201ENST00000384121 107 ntBASIC5.14□□□□□ -1.59
SSU72Q9NP77 RNU6-1127P-201ENST00000384580 107 ntBASIC5.14□□□□□ -1.59
SSU72Q9NP77 AL031985.1-201ENST00000392713 418 ntBASIC5.14□□□□□ -1.59
SSU72Q9NP77 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.14□□□□□ -1.59
SSU72Q9NP77 AC093155.2-201ENST00000420734 937 ntBASIC5.14□□□□□ -1.59
SSU72Q9NP77 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.14□□□□□ -1.59
SSU72Q9NP77 RPL23AP38-201ENST00000423801 469 ntBASIC5.14□□□□□ -1.59
SSU72Q9NP77 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.14□□□□□ -1.59
SSU72Q9NP77 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.14□□□□□ -1.59
SSU72Q9NP77 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.14□□□□□ -1.59
SSU72Q9NP77 HMGB1P12-201ENST00000438594 598 ntBASIC5.14□□□□□ -1.59
SSU72Q9NP77 RPL23AP89-201ENST00000439324 255 ntBASIC5.14□□□□□ -1.59
SSU72Q9NP77 RPS15AP27-201ENST00000449183 343 ntBASIC5.14□□□□□ -1.59
SSU72Q9NP77 AL354710.1-201ENST00000453641 246 ntBASIC5.14□□□□□ -1.59
SSU72Q9NP77 RPL12P25-201ENST00000455592 494 ntBASIC5.14□□□□□ -1.59
SSU72Q9NP77 SCARNA18-201ENST00000459004 134 ntBASIC5.14□□□□□ -1.59
SSU72Q9NP77 AC010655.3-201ENST00000478818 450 ntBASIC5.14□□□□□ -1.59
SSU72Q9NP77 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.14□□□□□ -1.59
SSU72Q9NP77 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.14□□□□□ -1.59
SSU72Q9NP77 SNORA25.10-201ENST00000515926 124 ntBASIC5.14□□□□□ -1.59
SSU72Q9NP77 AC006512.2-201ENST00000543250 486 ntBASIC5.14□□□□□ -1.59
SSU72Q9NP77 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC5.14□□□□□ -1.59
SSU72Q9NP77 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.14□□□□□ -1.59
SSU72Q9NP77 AL121576.1-201ENST00000556055 276 ntBASIC5.14□□□□□ -1.59
SSU72Q9NP77 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SSU72Q9NP77 AC010653.1-201ENST00000571108 881 ntBASIC5.14□□□□□ -1.59
SSU72Q9NP77 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.14□□□□□ -1.59
SSU72Q9NP77 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.14□□□□□ -1.59
SSU72Q9NP77 AL162373.1-201ENST00000620433 407 ntBASIC5.14□□□□□ -1.59
SSU72Q9NP77 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.14□□□□□ -1.59
SSU72Q9NP77 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.14□□□□□ -1.59
SSU72Q9NP77 AL732372.2-225ENST00000642124 456 ntBASIC5.14□□□□□ -1.59
SSU72Q9NP77 AL022322.2-201ENST00000624072 20397 ntBASIC5.14□□□□□ -1.59
SSU72Q9NP77 TPTE2P4-201ENST00000258589 1605 ntBASIC5.14□□□□□ -1.59
SSU72Q9NP77 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSU72Q9NP77 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSU72Q9NP77 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSU72Q9NP77 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSU72Q9NP77 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SSU72Q9NP77 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SSU72Q9NP77 AC063976.2-201ENST00000425667 3556 ntBASIC5.14□□□□□ -1.59
SSU72Q9NP77 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.14□□□□□ -1.59
SSU72Q9NP77 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSU72Q9NP77 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.14□□□□□ -1.59
SSU72Q9NP77 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.13□□□□□ -1.59
SSU72Q9NP77 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SSU72Q9NP77 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SSU72Q9NP77 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms