Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 RPL23AP92-201ENST00000603609 255 ntBASIC4.36□□□□□ -1.71
SSBP3Q9BWW4 AC108738.1-201ENST00000603703 237 ntBASIC4.36□□□□□ -1.71
SSBP3Q9BWW4 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.36□□□□□ -1.71
SSBP3Q9BWW4 AC006157.1-201ENST00000611750 366 ntBASIC4.36□□□□□ -1.71
SSBP3Q9BWW4 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.36□□□□□ -1.71
SSBP3Q9BWW4 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.36□□□□□ -1.71
SSBP3Q9BWW4 MIR7155-201ENST00000615925 56 ntBASIC4.36□□□□□ -1.71
SSBP3Q9BWW4 AC007485.1-201ENST00000616755 206 ntBASIC4.36□□□□□ -1.71
SSBP3Q9BWW4 AL034549.2-201ENST00000618285 3373 ntBASIC4.36□□□□□ -1.71
SSBP3Q9BWW4 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SSBP3Q9BWW4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSBP3Q9BWW4 DHX40P1-201ENST00000588725 1412 ntBASIC4.36□□□□□ -1.71
SSBP3Q9BWW4 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSBP3Q9BWW4 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.36□□□□□ -1.71
SSBP3Q9BWW4 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSBP3Q9BWW4 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
SSBP3Q9BWW4 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 AL022322.2-201ENST00000624072 20397 ntBASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 RNU6-82P-201ENST00000363970 107 ntBASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 RNU1-146P-201ENST00000364015 165 ntBASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 RNU5A-8P-201ENST00000364102 114 ntBASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 SNORA75B-201ENST00000384053 137 ntBASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 Y_RNA.455-201ENST00000384230 98 ntBASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 DSTNP4-201ENST00000399472 474 ntBASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 RNA5SP296-201ENST00000410523 111 ntBASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 Y_RNA.646-201ENST00000410980 101 ntBASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 DPH3P2-201ENST00000422618 250 ntBASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 SKA2P1-201ENST00000425592 390 ntBASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 AL590233.1-201ENST00000430017 456 ntBASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 RPL23AP43-201ENST00000446445 471 ntBASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 RPL7P52-201ENST00000449200 742 ntBASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 AL118520.1-201ENST00000450770 291 ntBASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 CBX1P2-201ENST00000453841 458 ntBASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 AC079804.1-201ENST00000461922 436 ntBASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 AC004801.2-202ENST00000463559 283 ntBASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 RPL7AP6-201ENST00000477943 801 ntBASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 RPL7P43-201ENST00000478876 753 ntBASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 FTH1P21-201ENST00000512179 511 ntBASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 RNU2-10P-201ENST00000516375 211 ntBASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 RNU7-51P-201ENST00000516560 62 ntBASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 RN7SKP66-201ENST00000516681 231 ntBASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 AC068993.1-201ENST00000546724 589 ntBASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 MIR3672-201ENST00000584290 82 ntBASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 AC006116.3-201ENST00000592968 361 ntBASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 AC104662.1-201ENST00000604448 511 ntBASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 AC245517.5-201ENST00000611529 162 ntBASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 AC098657.3-201ENST00000620434 263 ntBASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 PLCE1P1-201ENST00000622094 305 ntBASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 AL669831.3-213ENST00000636676 183 ntBASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SSBP3Q9BWW4 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 AC007342.5-201ENST00000571340 2142 ntBASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 AC009902.3-201ENST00000606235 2172 ntBASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 SMG1P7-201ENST00000565246 2704 ntBASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 U3.3-201ENST00000362986 216 ntBASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 Y_RNA.80-201ENST00000362996 102 ntBASIC4.34□□□□□ -1.71
SSBP3Q9BWW4 Y_RNA.252-201ENST00000364556 101 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms