Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
LIMD2Q9BT23 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC1.64□□□□□ -2.15
LIMD2Q9BT23 OR5H2-201ENST00000355273 945 ntBASIC1.64□□□□□ -2.15
LIMD2Q9BT23 SNORA71.3-201ENST00000362582 128 ntBASIC1.64□□□□□ -2.15
LIMD2Q9BT23 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.64□□□□□ -2.15
LIMD2Q9BT23 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC1.64□□□□□ -2.15
LIMD2Q9BT23 Z85994.2-201ENST00000434327 452 ntBASIC1.64□□□□□ -2.15
LIMD2Q9BT23 AL645638.1-201ENST00000440519 361 ntBASIC1.64□□□□□ -2.15
LIMD2Q9BT23 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC1.64□□□□□ -2.15
LIMD2Q9BT23 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.64□□□□□ -2.15
LIMD2Q9BT23 RNA5SP310-201ENST00000459084 116 ntBASIC1.64□□□□□ -2.15
LIMD2Q9BT23 RBM43P1-201ENST00000476891 1081 ntBASIC1.64□□□□□ -2.15
LIMD2Q9BT23 RPL23AP70-201ENST00000483361 460 ntBASIC1.64□□□□□ -2.15
LIMD2Q9BT23 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC1.64□□□□□ -2.15
LIMD2Q9BT23 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC1.64□□□□□ -2.15
LIMD2Q9BT23 DYNLL1P6-201ENST00000503440 264 ntBASIC1.64□□□□□ -2.15
LIMD2Q9BT23 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC1.64□□□□□ -2.15
LIMD2Q9BT23 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.64□□□□□ -2.15
LIMD2Q9BT23 AC008885.2-201ENST00000509506 930 ntBASIC1.64□□□□□ -2.15
LIMD2Q9BT23 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
LIMD2Q9BT23 AC104057.1-201ENST00000515547 497 ntBASIC1.64□□□□□ -2.15
LIMD2Q9BT23 RNA5SP341-201ENST00000516261 117 ntBASIC1.64□□□□□ -2.15
LIMD2Q9BT23 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.64□□□□□ -2.15
LIMD2Q9BT23 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.64□□□□□ -2.15
LIMD2Q9BT23 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC1.64□□□□□ -2.15
LIMD2Q9BT23 AC022080.3-201ENST00000544433 482 ntBASIC1.64□□□□□ -2.15
LIMD2Q9BT23 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.64□□□□□ -2.15
LIMD2Q9BT23 MIR4504-201ENST00000577413 92 ntBASIC1.64□□□□□ -2.15
LIMD2Q9BT23 MIR4444-1-201ENST00000581696 74 ntBASIC1.64□□□□□ -2.15
LIMD2Q9BT23 MIR4325-201ENST00000583049 90 ntBASIC1.64□□□□□ -2.15
LIMD2Q9BT23 MIR5195-201ENST00000583555 115 ntBASIC1.64□□□□□ -2.15
LIMD2Q9BT23 MIR4444-2-201ENST00000584390 74 ntBASIC1.64□□□□□ -2.15
LIMD2Q9BT23 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.64□□□□□ -2.15
LIMD2Q9BT23 AC008739.2-201ENST00000597006 317 ntBASIC1.64□□□□□ -2.15
LIMD2Q9BT23 BNIP3P33-201ENST00000598912 569 ntBASIC1.64□□□□□ -2.15
LIMD2Q9BT23 AC024153.1-201ENST00000603103 365 ntBASIC1.64□□□□□ -2.15
LIMD2Q9BT23 U73023.1-201ENST00000603134 700 ntBASIC1.64□□□□□ -2.15
LIMD2Q9BT23 XIAPP1-201ENST00000603162 600 ntBASIC1.64□□□□□ -2.15
LIMD2Q9BT23 RPL23AP92-201ENST00000603609 255 ntBASIC1.64□□□□□ -2.15
LIMD2Q9BT23 BX664608.1-201ENST00000610519 487 ntBASIC1.64□□□□□ -2.15
LIMD2Q9BT23 PCNP-208ENST00000627393 136 ntTSL 2 BASIC1.64□□□□□ -2.15
LIMD2Q9BT23 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
LIMD2Q9BT23 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
LIMD2Q9BT23 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
LIMD2Q9BT23 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
LIMD2Q9BT23 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.64□□□□□ -2.15
LIMD2Q9BT23 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.63□□□□□ -2.15
LIMD2Q9BT23 AL596028.1-201ENST00000326971 197 ntBASIC1.63□□□□□ -2.15
LIMD2Q9BT23 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
LIMD2Q9BT23 SET-203ENST00000372688 801 ntTSL 2 BASIC1.63□□□□□ -2.15
LIMD2Q9BT23 DSTNP4-201ENST00000399472 474 ntBASIC1.63□□□□□ -2.15
LIMD2Q9BT23 AC096533.1-201ENST00000411645 353 ntBASIC1.63□□□□□ -2.15
LIMD2Q9BT23 AL513175.2-201ENST00000422071 443 ntBASIC1.63□□□□□ -2.15
LIMD2Q9BT23 AC096632.1-201ENST00000427395 310 ntBASIC1.63□□□□□ -2.15
LIMD2Q9BT23 AL451062.2-201ENST00000427515 271 ntBASIC1.63□□□□□ -2.15
LIMD2Q9BT23 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC1.63□□□□□ -2.15
LIMD2Q9BT23 RPS29P6-201ENST00000438196 145 ntBASIC1.63□□□□□ -2.15
LIMD2Q9BT23 NANOGNBP1-201ENST00000448444 480 ntBASIC1.63□□□□□ -2.15
LIMD2Q9BT23 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
LIMD2Q9BT23 RPL21P41-201ENST00000459863 264 ntBASIC1.63□□□□□ -2.15
LIMD2Q9BT23 AC015908.1-201ENST00000478739 476 ntBASIC1.63□□□□□ -2.15
LIMD2Q9BT23 AC090096.1-201ENST00000489168 390 ntBASIC1.63□□□□□ -2.15
LIMD2Q9BT23 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.63□□□□□ -2.15
LIMD2Q9BT23 AC096751.1-202ENST00000502691 1067 ntBASIC1.63□□□□□ -2.15
LIMD2Q9BT23 FABP5P6-201ENST00000510588 409 ntBASIC1.63□□□□□ -2.15
LIMD2Q9BT23 AC093770.1-201ENST00000511559 571 ntBASIC1.63□□□□□ -2.15
LIMD2Q9BT23 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.63□□□□□ -2.15
LIMD2Q9BT23 IGLV3-17-201ENST00000519099 244 ntBASIC1.63□□□□□ -2.15
LIMD2Q9BT23 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC1.63□□□□□ -2.15
LIMD2Q9BT23 PRELID2P1-201ENST00000552837 301 ntBASIC1.63□□□□□ -2.15
LIMD2Q9BT23 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
LIMD2Q9BT23 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC1.63□□□□□ -2.15
LIMD2Q9BT23 AC007336.1-201ENST00000576365 3828 ntBASIC1.63□□□□□ -2.15
LIMD2Q9BT23 TPMTP1-201ENST00000592307 737 ntBASIC1.63□□□□□ -2.15
LIMD2Q9BT23 AL160237.3-201ENST00000604114 1013 ntBASIC1.63□□□□□ -2.15
LIMD2Q9BT23 AC093732.2-201ENST00000607950 274 ntBASIC1.63□□□□□ -2.15
LIMD2Q9BT23 AL391597.1-201ENST00000618707 694 ntBASIC1.63□□□□□ -2.15
LIMD2Q9BT23 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC1.63□□□□□ -2.15
LIMD2Q9BT23 AC095031.1-201ENST00000623685 672 ntBASIC1.63□□□□□ -2.15
LIMD2Q9BT23 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.63□□□□□ -2.15
LIMD2Q9BT23 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
LIMD2Q9BT23 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC1.63□□□□□ -2.15
LIMD2Q9BT23 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
LIMD2Q9BT23 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.62□□□□□ -2.15
LIMD2Q9BT23 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
LIMD2Q9BT23 RNA5SP374-201ENST00000362939 125 ntBASIC1.62□□□□□ -2.15
LIMD2Q9BT23 MIR421-201ENST00000365696 85 ntBASIC1.62□□□□□ -2.15
LIMD2Q9BT23 RNU6-891P-201ENST00000384280 111 ntBASIC1.62□□□□□ -2.15
LIMD2Q9BT23 SNORA54-201ENST00000384281 123 ntBASIC1.62□□□□□ -2.15
LIMD2Q9BT23 SNORA51.12-201ENST00000384448 134 ntBASIC1.62□□□□□ -2.15
LIMD2Q9BT23 TAS2R15P-201ENST00000390674 928 ntBASIC1.62□□□□□ -2.15
LIMD2Q9BT23 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
LIMD2Q9BT23 RPS4XP3-201ENST00000398541 413 ntBASIC1.62□□□□□ -2.15
LIMD2Q9BT23 MIR1303-201ENST00000408625 86 ntBASIC1.62□□□□□ -2.15
LIMD2Q9BT23 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC1.62□□□□□ -2.15
LIMD2Q9BT23 EEF1A1P41-201ENST00000414667 207 ntBASIC1.62□□□□□ -2.15
LIMD2Q9BT23 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
LIMD2Q9BT23 Z82209.1-201ENST00000422141 2135 ntBASIC1.62□□□□□ -2.15
LIMD2Q9BT23 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
LIMD2Q9BT23 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms