Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.93□□□□□ -1.78
NPAS1Q99742 AC114781.5-201ENST00000615297 108 ntBASIC3.93□□□□□ -1.78
NPAS1Q99742 uc_338.13-201ENST00000618243 179 ntBASIC3.93□□□□□ -1.78
NPAS1Q99742 AL359740.1-201ENST00000624340 592 ntBASIC3.93□□□□□ -1.78
NPAS1Q99742 AL159972.1-201ENST00000625150 448 ntBASIC3.93□□□□□ -1.78
NPAS1Q99742 FARSBP1-201ENST00000435808 1778 ntBASIC3.93□□□□□ -1.78
NPAS1Q99742 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.93□□□□□ -1.78
NPAS1Q99742 AC009902.3-201ENST00000606235 2172 ntBASIC3.93□□□□□ -1.78
NPAS1Q99742 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
NPAS1Q99742 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.93□□□□□ -1.78
NPAS1Q99742 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.93□□□□□ -1.78
NPAS1Q99742 AC018555.1-201ENST00000567548 1980 ntBASIC3.93□□□□□ -1.78
NPAS1Q99742 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.92□□□□□ -1.78
NPAS1Q99742 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.92□□□□□ -1.78
NPAS1Q99742 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NPAS1Q99742 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
NPAS1Q99742 FAM91A3P-201ENST00000456826 2544 ntBASIC3.92□□□□□ -1.78
NPAS1Q99742 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NPAS1Q99742 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
NPAS1Q99742 Y_RNA.3-201ENST00000362331 103 ntBASIC3.92□□□□□ -1.78
NPAS1Q99742 RNU1-132P-201ENST00000364300 164 ntBASIC3.92□□□□□ -1.78
NPAS1Q99742 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NPAS1Q99742 Y_RNA.505-201ENST00000384489 102 ntBASIC3.92□□□□□ -1.78
NPAS1Q99742 AL583834.1-201ENST00000406943 343 ntBASIC3.92□□□□□ -1.78
NPAS1Q99742 SNORA11F-201ENST00000408237 128 ntBASIC3.92□□□□□ -1.78
NPAS1Q99742 RN7SKP33-201ENST00000410942 340 ntBASIC3.92□□□□□ -1.78
NPAS1Q99742 RNU6-195P-201ENST00000411352 109 ntBASIC3.92□□□□□ -1.78
NPAS1Q99742 RNU6-516P-201ENST00000411381 104 ntBASIC3.92□□□□□ -1.78
NPAS1Q99742 AC127391.1-201ENST00000411737 98 ntBASIC3.92□□□□□ -1.78
NPAS1Q99742 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.92□□□□□ -1.78
NPAS1Q99742 AF274854.1-201ENST00000413236 615 ntBASIC3.92□□□□□ -1.78
NPAS1Q99742 MTCO3P12-201ENST00000416718 547 ntBASIC3.92□□□□□ -1.78
NPAS1Q99742 CCDC58P2-201ENST00000417131 366 ntBASIC3.92□□□□□ -1.78
NPAS1Q99742 AC233728.2-201ENST00000425348 757 ntBASIC3.92□□□□□ -1.78
NPAS1Q99742 AL353777.1-201ENST00000425552 326 ntBASIC3.92□□□□□ -1.78
NPAS1Q99742 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.92□□□□□ -1.78
NPAS1Q99742 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.92□□□□□ -1.78
NPAS1Q99742 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.92□□□□□ -1.78
NPAS1Q99742 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.92□□□□□ -1.78
NPAS1Q99742 GAPDHP17-201ENST00000449858 1001 ntBASIC3.92□□□□□ -1.78
NPAS1Q99742 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.92□□□□□ -1.78
NPAS1Q99742 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.92□□□□□ -1.78
NPAS1Q99742 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.92□□□□□ -1.78
NPAS1Q99742 SNORD121B-201ENST00000458838 81 ntBASIC3.92□□□□□ -1.78
NPAS1Q99742 RPS3AP17-201ENST00000472594 777 ntBASIC3.92□□□□□ -1.78
NPAS1Q99742 RPL23AP65-201ENST00000475608 468 ntBASIC3.92□□□□□ -1.78
NPAS1Q99742 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.92□□□□□ -1.78
NPAS1Q99742 RN7SL691P-201ENST00000494487 301 ntBASIC3.92□□□□□ -1.78
NPAS1Q99742 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.92□□□□□ -1.78
NPAS1Q99742 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.92□□□□□ -1.78
NPAS1Q99742 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.92□□□□□ -1.78
NPAS1Q99742 RNU6-720P-201ENST00000516363 108 ntBASIC3.92□□□□□ -1.78
NPAS1Q99742 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.92□□□□□ -1.78
NPAS1Q99742 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.92□□□□□ -1.78
NPAS1Q99742 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.92□□□□□ -1.78
NPAS1Q99742 HIGD1AP5-201ENST00000529959 259 ntBASIC3.92□□□□□ -1.78
NPAS1Q99742 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NPAS1Q99742 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.92□□□□□ -1.78
NPAS1Q99742 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.92□□□□□ -1.78
NPAS1Q99742 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.92□□□□□ -1.78
NPAS1Q99742 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.92□□□□□ -1.78
NPAS1Q99742 MIR3138-201ENST00000585238 82 ntBASIC3.92□□□□□ -1.78
NPAS1Q99742 AC020914.4-201ENST00000597690 277 ntBASIC3.92□□□□□ -1.78
NPAS1Q99742 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.92□□□□□ -1.78
NPAS1Q99742 AL133173.2-201ENST00000614270 90 ntBASIC3.92□□□□□ -1.78
NPAS1Q99742 AL021997.2-201ENST00000615674 271 ntBASIC3.92□□□□□ -1.78
NPAS1Q99742 AC008013.2-202ENST00000637965 364 ntBASIC3.92□□□□□ -1.78
NPAS1Q99742 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
NPAS1Q99742 MTND5P29-201ENST00000458676 1807 ntBASIC3.92□□□□□ -1.78
NPAS1Q99742 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NPAS1Q99742 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NPAS1Q99742 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NPAS1Q99742 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NPAS1Q99742 AC024560.2-201ENST00000507981 1497 ntBASIC3.92□□□□□ -1.78
NPAS1Q99742 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NPAS1Q99742 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
NPAS1Q99742 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
NPAS1Q99742 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NPAS1Q99742 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
NPAS1Q99742 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
NPAS1Q99742 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.91□□□□□ -1.78
NPAS1Q99742 RPL32P3-201ENST00000359025 275 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NPAS1Q99742 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
NPAS1Q99742 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
NPAS1Q99742 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
NPAS1Q99742 RNU6-259P-201ENST00000383999 107 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 SNORD3H-201ENST00000384486 214 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 Y_RNA.548-201ENST00000384656 105 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.91□□□□□ -1.78
NPAS1Q99742 RNA5SP36-201ENST00000410197 133 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 RNU6-248P-201ENST00000410720 107 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.91□□□□□ -1.78
NPAS1Q99742 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.91□□□□□ -1.78
NPAS1Q99742 RPS15AP12-201ENST00000419498 388 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 BEND7P1-201ENST00000422058 457 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NPAS1Q99742 OR5BE1P-201ENST00000425977 939 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 AC010975.2-201ENST00000427781 588 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 OR2B8P-201ENST00000432841 938 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms