Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AL512283.1-201ENST00000606756 1384 ntBASIC2.67□□□□□ -1.98
CCDC42Q96M95 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC42Q96M95 FRG1BP-201ENST00000278882 761 ntBASIC2.67□□□□□ -1.98
CCDC42Q96M95 MT-TC-201ENST00000387405 66 ntBASIC2.67□□□□□ -1.98
CCDC42Q96M95 MTCO3P12-201ENST00000416718 547 ntBASIC2.67□□□□□ -1.98
CCDC42Q96M95 AL606495.1-201ENST00000422100 813 ntBASIC2.67□□□□□ -1.98
CCDC42Q96M95 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC42Q96M95 AL389915.1-201ENST00000422463 466 ntBASIC2.67□□□□□ -1.98
CCDC42Q96M95 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC42Q96M95 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC42Q96M95 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.67□□□□□ -1.98
CCDC42Q96M95 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.67□□□□□ -1.98
CCDC42Q96M95 AC011825.1-201ENST00000484967 388 ntBASIC2.67□□□□□ -1.98
CCDC42Q96M95 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC42Q96M95 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC42Q96M95 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC42Q96M95 RPL37P25-201ENST00000507308 276 ntBASIC2.67□□□□□ -1.98
CCDC42Q96M95 AC010625.1-201ENST00000511296 403 ntBASIC2.67□□□□□ -1.98
CCDC42Q96M95 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC42Q96M95 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC42Q96M95 OR5AK3P-201ENST00000527486 1297 ntBASIC2.67□□□□□ -1.98
CCDC42Q96M95 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC42Q96M95 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC42Q96M95 TPMTP1-201ENST00000592307 737 ntBASIC2.67□□□□□ -1.98
CCDC42Q96M95 AL442067.2-201ENST00000614033 363 ntBASIC2.67□□□□□ -1.98
CCDC42Q96M95 AC140725.3-201ENST00000616193 880 ntBASIC2.67□□□□□ -1.98
CCDC42Q96M95 AC002064.3-201ENST00000623448 346 ntBASIC2.67□□□□□ -1.98
CCDC42Q96M95 AC004777.1-201ENST00000624317 287 ntBASIC2.67□□□□□ -1.98
CCDC42Q96M95 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC42Q96M95 ZNF734P-201ENST00000419494 1534 ntBASIC2.67□□□□□ -1.98
CCDC42Q96M95 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC42Q96M95 MAPK10-266ENST00000641066 6555 ntBASIC2.66□□□□□ -1.98
CCDC42Q96M95 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC42Q96M95 Y_RNA.493-201ENST00000384422 102 ntBASIC2.66□□□□□ -1.98
CCDC42Q96M95 SNORA41-201ENST00000384675 132 ntBASIC2.66□□□□□ -1.98
CCDC42Q96M95 RNU4-78P-201ENST00000410940 126 ntBASIC2.66□□□□□ -1.98
CCDC42Q96M95 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC42Q96M95 AC073508.1-201ENST00000428866 656 ntBASIC2.66□□□□□ -1.98
CCDC42Q96M95 AC105272.1-201ENST00000438604 198 ntBASIC2.66□□□□□ -1.98
CCDC42Q96M95 AL513321.1-201ENST00000441175 761 ntBASIC2.66□□□□□ -1.98
CCDC42Q96M95 RPS26P56-201ENST00000444468 240 ntBASIC2.66□□□□□ -1.98
CCDC42Q96M95 RPL23AP15-201ENST00000450202 459 ntBASIC2.66□□□□□ -1.98
CCDC42Q96M95 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.66□□□□□ -1.98
CCDC42Q96M95 RPS29P12-201ENST00000460178 152 ntBASIC2.66□□□□□ -1.98
CCDC42Q96M95 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC42Q96M95 RNA5SP402-201ENST00000517148 110 ntBASIC2.66□□□□□ -1.98
CCDC42Q96M95 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC42Q96M95 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CCDC42Q96M95 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC42Q96M95 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC42Q96M95 CKS1BP1-201ENST00000555221 240 ntBASIC2.66□□□□□ -1.98
CCDC42Q96M95 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC42Q96M95 AC087481.2-201ENST00000565492 330 ntBASIC2.66□□□□□ -1.98
CCDC42Q96M95 MIR1254-2-201ENST00000579553 63 ntBASIC2.66□□□□□ -1.98
CCDC42Q96M95 RPL23AP78-201ENST00000599928 470 ntBASIC2.66□□□□□ -1.98
CCDC42Q96M95 MTCO3P22-201ENST00000603219 784 ntBASIC2.66□□□□□ -1.98
CCDC42Q96M95 AL645944.1-201ENST00000603857 493 ntBASIC2.66□□□□□ -1.98
CCDC42Q96M95 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC42Q96M95 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC2.66□□□□□ -1.98
CCDC42Q96M95 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC42Q96M95 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.65□□□□□ -1.98
CCDC42Q96M95 AC073346.2-201ENST00000624724 2058 ntBASIC2.65□□□□□ -1.98
CCDC42Q96M95 AC016716.1-201ENST00000265882 708 ntBASIC2.65□□□□□ -1.99
CCDC42Q96M95 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC42Q96M95 RNU6-859P-201ENST00000362728 107 ntBASIC2.65□□□□□ -1.99
CCDC42Q96M95 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC42Q96M95 ANAPC10P1-201ENST00000395991 556 ntBASIC2.65□□□□□ -1.99
CCDC42Q96M95 RN7SKP27-201ENST00000410684 333 ntBASIC2.65□□□□□ -1.99
CCDC42Q96M95 RNU2-25P-201ENST00000411041 191 ntBASIC2.65□□□□□ -1.99
CCDC42Q96M95 LINC01347-201ENST00000417964 355 ntBASIC2.65□□□□□ -1.99
CCDC42Q96M95 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.65□□□□□ -1.99
CCDC42Q96M95 RPL36P19-201ENST00000430744 301 ntBASIC2.65□□□□□ -1.99
CCDC42Q96M95 CR769767.1-201ENST00000436337 346 ntBASIC2.65□□□□□ -1.99
CCDC42Q96M95 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC42Q96M95 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.65□□□□□ -1.99
CCDC42Q96M95 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.65□□□□□ -1.99
CCDC42Q96M95 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC42Q96M95 RPPH1-2P-201ENST00000516688 293 ntBASIC2.65□□□□□ -1.99
CCDC42Q96M95 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.65□□□□□ -1.99
CCDC42Q96M95 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC42Q96M95 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC42Q96M95 AL391156.1-201ENST00000554965 554 ntBASIC2.65□□□□□ -1.99
CCDC42Q96M95 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.65□□□□□ -1.99
CCDC42Q96M95 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC42Q96M95 AC245036.5-201ENST00000596330 847 ntBASIC2.65□□□□□ -1.99
CCDC42Q96M95 XIAPP1-201ENST00000603162 600 ntBASIC2.65□□□□□ -1.99
CCDC42Q96M95 SUMO2P14-201ENST00000604488 293 ntBASIC2.65□□□□□ -1.99
CCDC42Q96M95 AC012468.1-201ENST00000604888 430 ntBASIC2.65□□□□□ -1.99
CCDC42Q96M95 AL137847.3-201ENST00000611521 109 ntBASIC2.65□□□□□ -1.99
CCDC42Q96M95 AC011890.2-201ENST00000613393 294 ntBASIC2.65□□□□□ -1.99
CCDC42Q96M95 AC095031.1-201ENST00000623685 672 ntBASIC2.65□□□□□ -1.99
CCDC42Q96M95 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.65□□□□□ -1.99
CCDC42Q96M95 AL137790.1-201ENST00000634283 177 ntBASIC2.65□□□□□ -1.99
CCDC42Q96M95 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC42Q96M95 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC42Q96M95 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC42Q96M95 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC42Q96M95 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC42Q96M95 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC42Q96M95 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms