Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 FABP5P14-201ENST00000437273 393 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.79□□□□□ -1.64
NUP43Q8NFH3 AC092013.1-201ENST00000438795 332 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.79□□□□□ -1.64
NUP43Q8NFH3 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.79□□□□□ -1.64
NUP43Q8NFH3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.79□□□□□ -1.64
NUP43Q8NFH3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.79□□□□□ -1.64
NUP43Q8NFH3 ARL2BPP10-201ENST00000446487 531 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 AC016696.1-201ENST00000446949 318 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 EEF1A1P1-201ENST00000447052 739 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 RPL10P17-201ENST00000453852 316 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 RPL35AP28-201ENST00000459730 331 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 RN7SL443P-201ENST00000464331 290 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 AC009127.1-201ENST00000467090 155 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.79□□□□□ -1.64
NUP43Q8NFH3 TRBVA-201ENST00000498804 316 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 AC024558.1-201ENST00000505008 528 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 MTCYBP40-201ENST00000509390 1135 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 AC098591.2-201ENST00000510152 315 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.79□□□□□ -1.64
NUP43Q8NFH3 AC090136.1-201ENST00000520009 240 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.79□□□□□ -1.64
NUP43Q8NFH3 COX6CP5-201ENST00000527162 228 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.79□□□□□ -1.64
NUP43Q8NFH3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.79□□□□□ -1.64
NUP43Q8NFH3 AL117187.1-201ENST00000555482 181 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 AL133153.1-201ENST00000557756 303 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.79□□□□□ -1.64
NUP43Q8NFH3 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.79□□□□□ -1.64
NUP43Q8NFH3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC4.79□□□□□ -1.64
NUP43Q8NFH3 IMMP1LP3-201ENST00000604197 224 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.79□□□□□ -1.64
NUP43Q8NFH3 AC018445.2-201ENST00000622987 260 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 AL136313.1-201ENST00000624804 202 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
NUP43Q8NFH3 MTND4P1-201ENST00000457501 1466 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NUP43Q8NFH3 AC114947.2-201ENST00000565748 2125 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.79□□□□□ -1.64
NUP43Q8NFH3 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.78□□□□□ -1.64
NUP43Q8NFH3 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.78□□□□□ -1.64
NUP43Q8NFH3 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.78□□□□□ -1.64
NUP43Q8NFH3 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NUP43Q8NFH3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.78□□□□□ -1.64
NUP43Q8NFH3 AC066616.2-201ENST00000559334 1481 ntBASIC4.78□□□□□ -1.64
NUP43Q8NFH3 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NUP43Q8NFH3 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NUP43Q8NFH3 SNORA17.1-201ENST00000362945 126 ntBASIC4.78□□□□□ -1.64
NUP43Q8NFH3 RNU6-179P-201ENST00000363350 107 ntBASIC4.78□□□□□ -1.64
NUP43Q8NFH3 Y_RNA.148-201ENST00000363557 117 ntBASIC4.78□□□□□ -1.64
NUP43Q8NFH3 SNORD113-7-201ENST00000363762 77 ntBASIC4.78□□□□□ -1.64
NUP43Q8NFH3 RNU6-278P-201ENST00000390945 109 ntBASIC4.78□□□□□ -1.64
NUP43Q8NFH3 AL121834.1-202ENST00000404494 277 ntBASIC4.78□□□□□ -1.64
NUP43Q8NFH3 DUTP5-201ENST00000406790 469 ntBASIC4.78□□□□□ -1.64
NUP43Q8NFH3 U3.32-201ENST00000408116 212 ntBASIC4.78□□□□□ -1.64
NUP43Q8NFH3 RN7SKP16-201ENST00000410180 299 ntBASIC4.78□□□□□ -1.64
NUP43Q8NFH3 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.78□□□□□ -1.64
NUP43Q8NFH3 AC068533.1-201ENST00000418542 415 ntBASIC4.78□□□□□ -1.64
NUP43Q8NFH3 RPL31P12-201ENST00000422587 358 ntBASIC4.78□□□□□ -1.64
NUP43Q8NFH3 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.78□□□□□ -1.64
NUP43Q8NFH3 SKA2P1-201ENST00000425592 390 ntBASIC4.78□□□□□ -1.64
NUP43Q8NFH3 AL139148.1-201ENST00000427122 680 ntBASIC4.78□□□□□ -1.64
NUP43Q8NFH3 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.78□□□□□ -1.64
NUP43Q8NFH3 AC005019.1-201ENST00000436455 431 ntBASIC4.78□□□□□ -1.64
NUP43Q8NFH3 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.78□□□□□ -1.64
NUP43Q8NFH3 AC079804.1-201ENST00000461922 436 ntBASIC4.78□□□□□ -1.64
NUP43Q8NFH3 AC022034.3-201ENST00000471393 478 ntBASIC4.78□□□□□ -1.64
NUP43Q8NFH3 RN7SL809P-201ENST00000482040 297 ntBASIC4.78□□□□□ -1.64
NUP43Q8NFH3 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.78□□□□□ -1.64
NUP43Q8NFH3 RPL39P5-202ENST00000512505 151 ntBASIC4.78□□□□□ -1.64
NUP43Q8NFH3 AC108043.1-201ENST00000512696 574 ntBASIC4.78□□□□□ -1.64
NUP43Q8NFH3 AC016065.2-201ENST00000514530 444 ntBASIC4.78□□□□□ -1.64
NUP43Q8NFH3 RNU6-798P-201ENST00000516912 103 ntBASIC4.78□□□□□ -1.64
NUP43Q8NFH3 RNA5SP454-201ENST00000517231 127 ntBASIC4.78□□□□□ -1.64
NUP43Q8NFH3 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.78□□□□□ -1.64
NUP43Q8NFH3 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.78□□□□□ -1.64
NUP43Q8NFH3 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.78□□□□□ -1.64
NUP43Q8NFH3 AL137161.1-201ENST00000532231 390 ntBASIC4.78□□□□□ -1.64
NUP43Q8NFH3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NUP43Q8NFH3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NUP43Q8NFH3 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.78□□□□□ -1.64
NUP43Q8NFH3 NDUFB4P11-201ENST00000560510 395 ntBASIC4.78□□□□□ -1.64
NUP43Q8NFH3 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.78□□□□□ -1.64
NUP43Q8NFH3 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.78□□□□□ -1.64
NUP43Q8NFH3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
NUP43Q8NFH3 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.78□□□□□ -1.64
NUP43Q8NFH3 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.78□□□□□ -1.64
NUP43Q8NFH3 AP005432.2-201ENST00000608162 586 ntBASIC4.78□□□□□ -1.64
NUP43Q8NFH3 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.78□□□□□ -1.64
NUP43Q8NFH3 RPSAP73-201ENST00000614820 330 ntBASIC4.78□□□□□ -1.64
NUP43Q8NFH3 AC087588.2-201ENST00000617667 426 ntBASIC4.78□□□□□ -1.64
NUP43Q8NFH3 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
NUP43Q8NFH3 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.78□□□□□ -1.64
NUP43Q8NFH3 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NUP43Q8NFH3 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NUP43Q8NFH3 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.78□□□□□ -1.64
NUP43Q8NFH3 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NUP43Q8NFH3 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NUP43Q8NFH3 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
NUP43Q8NFH3 SMG1P4-204ENST00000523028 4131 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 236 ms