Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 MIR376A1-201ENST00000616574 68 ntBASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 MIR6721-201ENST00000617181 87 ntBASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC116Q8IYX3 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 AC022164.1-201ENST00000568767 2673 ntBASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 Z75746.1-201ENST00000440243 2080 ntBASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 Y_RNA.16-201ENST00000362421 102 ntBASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 RNA5SP110-201ENST00000362638 115 ntBASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 RNU6-704P-201ENST00000364162 103 ntBASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 RNU6-371P-201ENST00000364283 108 ntBASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 RNU6-740P-201ENST00000364734 105 ntBASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 Y_RNA.458-201ENST00000384240 102 ntBASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 RNU6-933P-201ENST00000384424 107 ntBASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 MIR613-201ENST00000385248 95 ntBASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 SNORD115-46-201ENST00000390982 71 ntBASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 AL121835.1-201ENST00000404250 354 ntBASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 AL035422.1-201ENST00000414193 397 ntBASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 RPL21P90-201ENST00000415692 466 ntBASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 BX842559.1-201ENST00000419615 532 ntBASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 RPS15AP6-201ENST00000420703 385 ntBASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 AL445305.1-201ENST00000432577 575 ntBASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 H3F3BP1-201ENST00000440551 403 ntBASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 FHP1-201ENST00000442741 703 ntBASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 AL513124.1-201ENST00000450410 614 ntBASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 AC239809.1-201ENST00000450470 217 ntBASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 RPL7P23-201ENST00000493874 747 ntBASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 OR51K1P-201ENST00000510214 950 ntBASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 CR383656.7-201ENST00000548164 174 ntBASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 MRPS21P8-201ENST00000569196 235 ntBASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 MIR5701-3-201ENST00000578890 82 ntBASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 MIR5701-1-201ENST00000585138 82 ntBASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 MIR132-201ENST00000591554 101 ntBASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 MIR5701-2-201ENST00000615634 82 ntBASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 AC021753.1-201ENST00000635724 168 ntBASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC116Q8IYX3 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 Y_RNA.170-201ENST00000363746 110 ntBASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 RNU6-700P-201ENST00000391043 107 ntBASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 AL513475.1-201ENST00000406602 315 ntBASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 AL096829.1-201ENST00000413677 457 ntBASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 COX6CP10-201ENST00000416832 224 ntBASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 RPL35AP31-201ENST00000418340 337 ntBASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 AC015977.1-201ENST00000418887 292 ntBASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 OR4C10P-201ENST00000434991 931 ntBASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 GAPDHP59-201ENST00000435908 267 ntBASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 RPL23AP22-201ENST00000437556 453 ntBASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 Z92846.1-201ENST00000456203 268 ntBASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 AC124945.1-201ENST00000485133 188 ntBASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 AC114728.1-201ENST00000488289 483 ntBASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 AL035690.1-201ENST00000490892 383 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms