Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 SDAD1P1-202ENST00000524156 2051 ntBASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 AC007159.1-201ENST00000566529 4706 ntBASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 AL136964.1-201ENST00000622038 2990 ntBASIC5.58□□□□□ -1.52
NPAS4Q8IUM7 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 AL139276.1-201ENST00000311910 1001 ntBASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 RNU6-1287P-201ENST00000362914 107 ntBASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 RN7SKP153-201ENST00000365026 316 ntBASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 RNU6-1060P-201ENST00000384664 107 ntBASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 AL583834.1-201ENST00000406943 343 ntBASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 DUTP6-201ENST00000425573 462 ntBASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 NDUFB4P8-201ENST00000435351 367 ntBASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 RPL5P25-201ENST00000441148 775 ntBASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 AC112498.1-201ENST00000444401 332 ntBASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 MTND3P16-201ENST00000452205 344 ntBASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 AC007547.1-201ENST00000462177 490 ntBASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 AC112206.3-201ENST00000514578 389 ntBASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 RANP3-201ENST00000530970 276 ntBASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 AC023050.3-201ENST00000541142 333 ntBASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 AC093249.1-201ENST00000567049 203 ntBASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 MIR4270-201ENST00000581799 70 ntBASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 AC113139.1-201ENST00000605049 239 ntBASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 AC009248.2-201ENST00000619826 254 ntBASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 AL589994.2-201ENST00000621124 579 ntBASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 SCARNA15-201ENST00000607520 4325 ntBASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 AC138907.8-201ENST00000623981 2256 ntBASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NPAS4Q8IUM7 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 AL391684.1-202ENST00000641293 1636 ntBASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 RNU6-188P-201ENST00000364207 107 ntBASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 RNU6-882P-201ENST00000391025 103 ntBASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 RNU6-903P-201ENST00000391270 109 ntBASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 RPL32P23-201ENST00000397237 405 ntBASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 AC110754.1-201ENST00000399740 601 ntBASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 RNU4-46P-201ENST00000410818 138 ntBASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 RPL7AP73-201ENST00000413490 353 ntBASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 MTCO3P46-201ENST00000425787 232 ntBASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 CYCSP43-201ENST00000438233 310 ntBASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 RPL21P133-201ENST00000443666 476 ntBASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 HMGN2P26-201ENST00000463169 339 ntBASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 TRBV1-201ENST00000476502 284 ntBASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 RPL21P99-201ENST00000480369 423 ntBASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 AC004062.1-201ENST00000509926 645 ntBASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 AC108078.2-201ENST00000510750 236 ntBASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 HMGN1P9-201ENST00000515212 298 ntBASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 AC105254.2-201ENST00000603636 436 ntBASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 AC108738.1-201ENST00000603703 237 ntBASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 AC134503.1-201ENST00000633048 54 ntBASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 API5P2-201ENST00000397055 1498 ntBASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NPAS4Q8IUM7 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms