Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 MIR23A-201ENST00000385245 73 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 MIR16-1-201ENST00000385271 89 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 MIR92A2-201ENST00000385299 75 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
USP43Q70EL4 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.75□□□□□ -1.81
USP43Q70EL4 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.75□□□□□ -1.81
USP43Q70EL4 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.75□□□□□ -1.81
USP43Q70EL4 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.75□□□□□ -1.81
USP43Q70EL4 AL009174.1-201ENST00000426577 416 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.75□□□□□ -1.81
USP43Q70EL4 AL050321.1-201ENST00000432363 400 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 AC011998.1-201ENST00000433403 117 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 RPS25P9-201ENST00000435591 252 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.75□□□□□ -1.81
USP43Q70EL4 CBX1P1-201ENST00000440184 427 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.75□□□□□ -1.81
USP43Q70EL4 COX6CP18-201ENST00000448769 222 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
USP43Q70EL4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.75□□□□□ -1.81
USP43Q70EL4 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.75□□□□□ -1.81
USP43Q70EL4 MTCO3P11-201ENST00000455103 774 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.75□□□□□ -1.81
USP43Q70EL4 KLF3P2-201ENST00000465138 268 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.75□□□□□ -1.81
USP43Q70EL4 TMED11P-201ENST00000479478 690 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 AL049830.2-201ENST00000480072 201 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 RPL9P6-201ENST00000492764 598 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.75□□□□□ -1.81
USP43Q70EL4 DYNLL1P6-201ENST00000503440 264 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 MTCYBP17-201ENST00000503579 789 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 AC090071.1-201ENST00000507713 644 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 RNU6-347P-201ENST00000516658 105 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.75□□□□□ -1.81
USP43Q70EL4 AP002812.4-201ENST00000532139 286 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.75□□□□□ -1.81
USP43Q70EL4 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.75□□□□□ -1.81
USP43Q70EL4 GNRHR2P1-201ENST00000555315 631 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.75□□□□□ -1.81
USP43Q70EL4 MIR4528-201ENST00000577763 90 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 MIR548Y-201ENST00000582739 110 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 AC110743.1-201ENST00000584870 478 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.75□□□□□ -1.81
USP43Q70EL4 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
USP43Q70EL4 KC877982.1-201ENST00000602313 470 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 AC090578.1-201ENST00000604955 591 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.75□□□□□ -1.81
USP43Q70EL4 AL713922.2-201ENST00000619384 716 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 AC073348.1-201ENST00000623002 331 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.75□□□□□ -1.81
USP43Q70EL4 LRRC77P-213ENST00000637727 880 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.75□□□□□ -1.81
USP43Q70EL4 AC024614.3-201ENST00000637860 256 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
USP43Q70EL4 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.75□□□□□ -1.81
USP43Q70EL4 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
USP43Q70EL4 IPO8P1-201ENST00000455509 3109 ntBASIC3.75□□□□□ -1.81
USP43Q70EL4 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.75□□□□□ -1.81
USP43Q70EL4 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
USP43Q70EL4 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
USP43Q70EL4 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.74□□□□□ -1.81
USP43Q70EL4 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
USP43Q70EL4 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.74□□□□□ -1.81
USP43Q70EL4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.74□□□□□ -1.81
USP43Q70EL4 U3.15-201ENST00000365398 212 ntBASIC3.74□□□□□ -1.81
USP43Q70EL4 RNU1-64P-201ENST00000365443 163 ntBASIC3.74□□□□□ -1.81
USP43Q70EL4 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
USP43Q70EL4 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
USP43Q70EL4 RNU6-328P-201ENST00000390887 106 ntBASIC3.74□□□□□ -1.81
USP43Q70EL4 RNU6-1009P-201ENST00000390996 107 ntBASIC3.74□□□□□ -1.81
USP43Q70EL4 RNU6-332P-201ENST00000391193 108 ntBASIC3.74□□□□□ -1.81
USP43Q70EL4 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
USP43Q70EL4 AC097374.1-203ENST00000400783 485 ntBASIC3.74□□□□□ -1.81
USP43Q70EL4 CYCSP45-201ENST00000402289 315 ntBASIC3.74□□□□□ -1.81
USP43Q70EL4 SNORA11C-201ENST00000408532 129 ntBASIC3.74□□□□□ -1.81
USP43Q70EL4 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.74□□□□□ -1.81
USP43Q70EL4 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.74□□□□□ -1.81
USP43Q70EL4 AL139413.1-201ENST00000421309 217 ntBASIC3.74□□□□□ -1.81
USP43Q70EL4 AF228730.4-201ENST00000421457 183 ntBASIC3.74□□□□□ -1.81
USP43Q70EL4 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.74□□□□□ -1.81
USP43Q70EL4 AL513174.1-201ENST00000423182 629 ntBASIC3.74□□□□□ -1.81
USP43Q70EL4 GLRXP1-201ENST00000423261 334 ntBASIC3.74□□□□□ -1.81
USP43Q70EL4 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.74□□□□□ -1.81
USP43Q70EL4 AC009965.2-201ENST00000425328 970 ntBASIC3.74□□□□□ -1.81
USP43Q70EL4 BTF3P10-201ENST00000433415 495 ntBASIC3.74□□□□□ -1.81
USP43Q70EL4 SEPT7P5-201ENST00000434048 306 ntBASIC3.74□□□□□ -1.81
USP43Q70EL4 MTND1P28-201ENST00000435623 950 ntBASIC3.74□□□□□ -1.81
USP43Q70EL4 MTCO1P14-201ENST00000441695 1559 ntBASIC3.74□□□□□ -1.81
USP43Q70EL4 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.74□□□□□ -1.81
USP43Q70EL4 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.74□□□□□ -1.81
USP43Q70EL4 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.74□□□□□ -1.81
USP43Q70EL4 MTCO3P20-201ENST00000454926 688 ntBASIC3.74□□□□□ -1.81
USP43Q70EL4 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
USP43Q70EL4 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.74□□□□□ -1.81
USP43Q70EL4 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.74□□□□□ -1.81
USP43Q70EL4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.74□□□□□ -1.81
USP43Q70EL4 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.74□□□□□ -1.81
USP43Q70EL4 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
USP43Q70EL4 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.74□□□□□ -1.81
USP43Q70EL4 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.74□□□□□ -1.81
USP43Q70EL4 AC026402.1-201ENST00000513642 170 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms