Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC1.63□□□□□ -2.15
VPS13CQ709C8 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC1.63□□□□□ -2.15
VPS13CQ709C8 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
VPS13CQ709C8 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.63□□□□□ -2.15
VPS13CQ709C8 MLLT10P2-201ENST00000506434 249 ntBASIC1.63□□□□□ -2.15
VPS13CQ709C8 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.63□□□□□ -2.15
VPS13CQ709C8 AP006248.2-201ENST00000623309 592 ntBASIC1.63□□□□□ -2.15
VPS13CQ709C8 AL160394.1-201ENST00000624765 724 ntBASIC1.63□□□□□ -2.15
VPS13CQ709C8 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
VPS13CQ709C8 EXOC5P1-201ENST00000510543 1969 ntBASIC1.63□□□□□ -2.15
VPS13CQ709C8 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
VPS13CQ709C8 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
VPS13CQ709C8 OR4K11P-201ENST00000431829 904 ntBASIC1.63□□□□□ -2.15
VPS13CQ709C8 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC1.63□□□□□ -2.15
VPS13CQ709C8 GZMAP1-201ENST00000503054 631 ntBASIC1.63□□□□□ -2.15
VPS13CQ709C8 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC1.63□□□□□ -2.15
VPS13CQ709C8 BMS1P7-201ENST00000602440 1052 ntBASIC1.63□□□□□ -2.15
VPS13CQ709C8 AC073387.2-201ENST00000604797 784 ntBASIC1.63□□□□□ -2.15
VPS13CQ709C8 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
VPS13CQ709C8 AC244517.1-201ENST00000606030 2086 ntBASIC1.63□□□□□ -2.15
VPS13CQ709C8 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
VPS13CQ709C8 RN7SKP226-201ENST00000364912 300 ntBASIC1.62□□□□□ -2.15
VPS13CQ709C8 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
VPS13CQ709C8 EI24P1-201ENST00000416584 867 ntBASIC1.62□□□□□ -2.15
VPS13CQ709C8 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC1.62□□□□□ -2.15
VPS13CQ709C8 RN7SKP40-201ENST00000517211 242 ntBASIC1.62□□□□□ -2.15
VPS13CQ709C8 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC1.62□□□□□ -2.15
VPS13CQ709C8 IGLVIV-66-1-201ENST00000521832 460 ntBASIC1.62□□□□□ -2.15
VPS13CQ709C8 HIGD1AP10-201ENST00000527837 282 ntBASIC1.62□□□□□ -2.15
VPS13CQ709C8 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC1.62□□□□□ -2.15
VPS13CQ709C8 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC1.62□□□□□ -2.15
VPS13CQ709C8 AC009237.8-201ENST00000445492 379 ntBASIC1.62□□□□□ -2.15
VPS13CQ709C8 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC1.62□□□□□ -2.15
VPS13CQ709C8 AL359740.1-201ENST00000624340 592 ntBASIC1.62□□□□□ -2.15
VPS13CQ709C8 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC1.62□□□□□ -2.15
VPS13CQ709C8 SDCBPP3-201ENST00000419629 891 ntBASIC1.62□□□□□ -2.15
VPS13CQ709C8 AL358453.1-201ENST00000422522 250 ntBASIC1.62□□□□□ -2.15
VPS13CQ709C8 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.62□□□□□ -2.15
VPS13CQ709C8 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.62□□□□□ -2.15
VPS13CQ709C8 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.62□□□□□ -2.15
VPS13CQ709C8 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.62□□□□□ -2.15
VPS13CQ709C8 AP000787.2-201ENST00000604432 568 ntBASIC1.62□□□□□ -2.15
VPS13CQ709C8 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
VPS13CQ709C8 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.61□□□□□ -2.15
VPS13CQ709C8 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
VPS13CQ709C8 API5P2-201ENST00000397055 1498 ntBASIC1.61□□□□□ -2.15
VPS13CQ709C8 SNORD21-201ENST00000383953 95 ntBASIC1.61□□□□□ -2.15
VPS13CQ709C8 AC009969.1-201ENST00000438726 172 ntBASIC1.61□□□□□ -2.15
VPS13CQ709C8 LAMTOR5P1-201ENST00000444290 270 ntBASIC1.61□□□□□ -2.15
VPS13CQ709C8 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC1.61□□□□□ -2.15
VPS13CQ709C8 POU5F1P7-201ENST00000508759 541 ntBASIC1.61□□□□□ -2.15
VPS13CQ709C8 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.61□□□□□ -2.15
VPS13CQ709C8 OR4H12P-201ENST00000556269 907 ntBASIC1.61□□□□□ -2.15
VPS13CQ709C8 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC1.61□□□□□ -2.15
VPS13CQ709C8 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.61□□□□□ -2.15
VPS13CQ709C8 AC244517.12-201ENST00000623581 663 ntBASIC1.61□□□□□ -2.15
VPS13CQ709C8 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
VPS13CQ709C8 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.61□□□□□ -2.15
VPS13CQ709C8 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC1.61□□□□□ -2.15
VPS13CQ709C8 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
VPS13CQ709C8 RNA5SP502-201ENST00000362694 119 ntBASIC1.61□□□□□ -2.15
VPS13CQ709C8 SET-203ENST00000372688 801 ntTSL 2 BASIC1.61□□□□□ -2.15
VPS13CQ709C8 SNORA48.3-201ENST00000391081 134 ntBASIC1.61□□□□□ -2.15
VPS13CQ709C8 AL021407.1-201ENST00000404531 386 ntBASIC1.61□□□□□ -2.15
VPS13CQ709C8 AC104332.2-201ENST00000429959 156 ntBASIC1.61□□□□□ -2.15
VPS13CQ709C8 HMGB1P31-201ENST00000437242 427 ntBASIC1.61□□□□□ -2.15
VPS13CQ709C8 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
VPS13CQ709C8 AL137159.1-201ENST00000452808 512 ntBASIC1.61□□□□□ -2.15
VPS13CQ709C8 CREM-226ENST00000469949 721 ntTSL 3 BASIC1.61□□□□□ -2.15
VPS13CQ709C8 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.61□□□□□ -2.15
VPS13CQ709C8 ZDHHC20P3-201ENST00000531576 336 ntBASIC1.61□□□□□ -2.15
VPS13CQ709C8 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.61□□□□□ -2.15
VPS13CQ709C8 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.61□□□□□ -2.15
VPS13CQ709C8 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.61□□□□□ -2.15
VPS13CQ709C8 AC010546.1-201ENST00000569391 485 ntBASIC1.61□□□□□ -2.15
VPS13CQ709C8 MIR6515-201ENST00000619843 57 ntBASIC1.61□□□□□ -2.15
VPS13CQ709C8 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
VPS13CQ709C8 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC1.61□□□□□ -2.15
VPS13CQ709C8 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.61□□□□□ -2.15
VPS13CQ709C8 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC1.61□□□□□ -2.15
VPS13CQ709C8 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.61□□□□□ -2.15
VPS13CQ709C8 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC1.61□□□□□ -2.15
VPS13CQ709C8 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.61□□□□□ -2.15
VPS13CQ709C8 AC091834.1-201ENST00000614543 472 ntBASIC1.61□□□□□ -2.15
VPS13CQ709C8 AC010872.1-201ENST00000624225 675 ntBASIC1.61□□□□□ -2.15
VPS13CQ709C8 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
VPS13CQ709C8 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.6□□□□□ -2.15
VPS13CQ709C8 SDR42E1P3-201ENST00000438345 502 ntBASIC1.6□□□□□ -2.15
VPS13CQ709C8 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC1.6□□□□□ -2.15
VPS13CQ709C8 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.6□□□□□ -2.15
VPS13CQ709C8 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC1.6□□□□□ -2.15
VPS13CQ709C8 PSMA6P4-201ENST00000603247 718 ntBASIC1.6□□□□□ -2.15
VPS13CQ709C8 AL391813.2-201ENST00000609113 322 ntBASIC1.6□□□□□ -2.15
VPS13CQ709C8 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
VPS13CQ709C8 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC1.6□□□□□ -2.15
VPS13CQ709C8 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
VPS13CQ709C8 RNU1-57P-201ENST00000384491 166 ntBASIC1.6□□□□□ -2.15
VPS13CQ709C8 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.6□□□□□ -2.15
VPS13CQ709C8 AC004486.1-201ENST00000546846 233 ntBASIC1.6□□□□□ -2.15
VPS13CQ709C8 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms