Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC171Q6TFL3 SNORA7.2-201ENST00000364446 145 ntBASIC2.78□□□□□ -1.96
CCDC171Q6TFL3 SNORA70B-201ENST00000384210 135 ntBASIC2.78□□□□□ -1.96
CCDC171Q6TFL3 RNU2-71P-201ENST00000411395 189 ntBASIC2.78□□□□□ -1.96
CCDC171Q6TFL3 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC171Q6TFL3 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC171Q6TFL3 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
CCDC171Q6TFL3 RPS15AP28-201ENST00000435088 386 ntBASIC2.78□□□□□ -1.96
CCDC171Q6TFL3 AP002371.1-201ENST00000463604 433 ntBASIC2.78□□□□□ -1.96
CCDC171Q6TFL3 RPL23AP55-201ENST00000498163 452 ntBASIC2.78□□□□□ -1.96
CCDC171Q6TFL3 ANXA2P1-201ENST00000505539 926 ntBASIC2.78□□□□□ -1.96
CCDC171Q6TFL3 AC008549.1-201ENST00000512900 643 ntBASIC2.78□□□□□ -1.96
CCDC171Q6TFL3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC171Q6TFL3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CCDC171Q6TFL3 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC171Q6TFL3 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC171Q6TFL3 AC007938.3-201ENST00000604965 623 ntBASIC2.78□□□□□ -1.96
CCDC171Q6TFL3 AC007620.3-201ENST00000608131 497 ntBASIC2.78□□□□□ -1.96
CCDC171Q6TFL3 AC011890.2-201ENST00000613393 294 ntBASIC2.78□□□□□ -1.96
CCDC171Q6TFL3 uc_338.9-201ENST00000617424 182 ntBASIC2.78□□□□□ -1.96
CCDC171Q6TFL3 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC171Q6TFL3 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC171Q6TFL3 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.97
CCDC171Q6TFL3 MAPK10-322ENST00000641485 4530 ntBASIC2.77□□□□□ -1.97
CCDC171Q6TFL3 AL591416.1-201ENST00000404015 867 ntBASIC2.77□□□□□ -1.97
CCDC171Q6TFL3 RPS4XP7-201ENST00000406274 780 ntBASIC2.77□□□□□ -1.97
CCDC171Q6TFL3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC171Q6TFL3 AC013404.1-201ENST00000413068 249 ntBASIC2.77□□□□□ -1.97
CCDC171Q6TFL3 EI24P1-201ENST00000416584 867 ntBASIC2.77□□□□□ -1.97
CCDC171Q6TFL3 SUMO1P4-201ENST00000429430 302 ntBASIC2.77□□□□□ -1.97
CCDC171Q6TFL3 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC171Q6TFL3 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.77□□□□□ -1.97
CCDC171Q6TFL3 RPL34P26-201ENST00000445636 354 ntBASIC2.77□□□□□ -1.97
CCDC171Q6TFL3 AL024509.2-201ENST00000493462 493 ntBASIC2.77□□□□□ -1.97
CCDC171Q6TFL3 RPL37P25-201ENST00000507308 276 ntBASIC2.77□□□□□ -1.97
CCDC171Q6TFL3 AC105137.2-201ENST00000569073 466 ntBASIC2.77□□□□□ -1.97
CCDC171Q6TFL3 MIR4446-201ENST00000578505 67 ntBASIC2.77□□□□□ -1.97
CCDC171Q6TFL3 MIR5194-201ENST00000582634 120 ntBASIC2.77□□□□□ -1.97
CCDC171Q6TFL3 SNORD84-203ENST00000584275 78 ntBASIC2.77□□□□□ -1.97
CCDC171Q6TFL3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.77□□□□□ -1.97
CCDC171Q6TFL3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CCDC171Q6TFL3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC171Q6TFL3 MTND5P3-201ENST00000438536 1800 ntBASIC2.77□□□□□ -1.97
CCDC171Q6TFL3 AC006020.1-201ENST00000420179 1854 ntBASIC2.77□□□□□ -1.97
CCDC171Q6TFL3 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC2.76□□□□□ -1.97
CCDC171Q6TFL3 OR5H15-201ENST00000383696 930 ntBASIC2.76□□□□□ -1.97
CCDC171Q6TFL3 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC171Q6TFL3 AC004022.2-201ENST00000413824 193 ntBASIC2.76□□□□□ -1.97
CCDC171Q6TFL3 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC171Q6TFL3 MTATP6P11-201ENST00000428071 670 ntBASIC2.76□□□□□ -1.97
CCDC171Q6TFL3 NF1P3-201ENST00000457709 450 ntBASIC2.76□□□□□ -1.97
CCDC171Q6TFL3 LARP7P4-201ENST00000481075 878 ntBASIC2.76□□□□□ -1.97
CCDC171Q6TFL3 RPL7L1P13-201ENST00000511702 739 ntBASIC2.76□□□□□ -1.97
CCDC171Q6TFL3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.76□□□□□ -1.97
CCDC171Q6TFL3 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC171Q6TFL3 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
CCDC171Q6TFL3 AC140725.3-201ENST00000616193 880 ntBASIC2.76□□□□□ -1.97
CCDC171Q6TFL3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.76□□□□□ -1.97
CCDC171Q6TFL3 MIR6766-201ENST00000622641 72 ntBASIC2.76□□□□□ -1.97
CCDC171Q6TFL3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC171Q6TFL3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.76□□□□□ -1.97
CCDC171Q6TFL3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC171Q6TFL3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
CCDC171Q6TFL3 AC097714.1-201ENST00000511272 1647 ntBASIC2.76□□□□□ -1.97
CCDC171Q6TFL3 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC171Q6TFL3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC171Q6TFL3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.75□□□□□ -1.97
CCDC171Q6TFL3 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.75□□□□□ -1.97
CCDC171Q6TFL3 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC171Q6TFL3 RNU4-53P-201ENST00000410828 140 ntBASIC2.75□□□□□ -1.97
CCDC171Q6TFL3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC171Q6TFL3 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC171Q6TFL3 HIGD1AP2-201ENST00000446367 280 ntBASIC2.75□□□□□ -1.97
CCDC171Q6TFL3 OR51B8P-201ENST00000449892 769 ntBASIC2.75□□□□□ -1.97
CCDC171Q6TFL3 RNA5SP281-201ENST00000516504 135 ntBASIC2.75□□□□□ -1.97
CCDC171Q6TFL3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC171Q6TFL3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC171Q6TFL3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC171Q6TFL3 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC171Q6TFL3 AC136601.2-201ENST00000604356 474 ntBASIC2.75□□□□□ -1.97
CCDC171Q6TFL3 AL355816.1-201ENST00000607951 118 ntBASIC2.75□□□□□ -1.97
CCDC171Q6TFL3 AC116563.2-201ENST00000624751 535 ntBASIC2.75□□□□□ -1.97
CCDC171Q6TFL3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC171Q6TFL3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
CCDC171Q6TFL3 ZNF658B-202ENST00000615961 3375 ntBASIC2.74□□□□□ -1.97
CCDC171Q6TFL3 CD24P4-201ENST00000382840 243 ntBASIC2.74□□□□□ -1.97
CCDC171Q6TFL3 SNORA3.2-201ENST00000408221 125 ntBASIC2.74□□□□□ -1.97
CCDC171Q6TFL3 RN7SKP192-201ENST00000411291 327 ntBASIC2.74□□□□□ -1.97
CCDC171Q6TFL3 SMC4P1-201ENST00000414479 527 ntBASIC2.74□□□□□ -1.97
CCDC171Q6TFL3 TRBV26-201ENST00000456572 344 ntBASIC2.74□□□□□ -1.97
CCDC171Q6TFL3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.74□□□□□ -1.97
CCDC171Q6TFL3 RN7SKP234-201ENST00000517173 224 ntBASIC2.74□□□□□ -1.97
CCDC171Q6TFL3 OR6C73P-201ENST00000546432 358 ntBASIC2.74□□□□□ -1.97
CCDC171Q6TFL3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC171Q6TFL3 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC171Q6TFL3 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.74□□□□□ -1.97
CCDC171Q6TFL3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC171Q6TFL3 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC171Q6TFL3 AC008687.2-201ENST00000597865 520 ntBASIC2.74□□□□□ -1.97
CCDC171Q6TFL3 AC019159.1-201ENST00000605094 187 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms