Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 TPRKBP2-201ENST00000565969 475 ntBASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 BPIFA4P-203ENST00000603168 689 ntBASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 AF250324.2-201ENST00000608299 610 ntBASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 AL359314.1-201ENST00000616913 261 ntBASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 MIR6891-201ENST00000618788 93 ntBASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 AC022140.2-201ENST00000623500 188 ntBASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 MIR6715B-201ENST00000637172 77 ntBASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.51□□□□□ -1.69
SLC44A4Q53GD3 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 AC074029.4-201ENST00000624796 1859 ntBASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 RNU6-989P-201ENST00000362756 107 ntBASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 RNU6-263P-201ENST00000363811 107 ntBASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 SNORA70E-201ENST00000384492 135 ntBASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 Y_RNA.548-201ENST00000384656 105 ntBASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 Y_RNA.554-201ENST00000384672 102 ntBASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 PTMAP2-201ENST00000397627 327 ntBASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 Y_RNA.598-201ENST00000410480 95 ntBASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 RN7SKP159-201ENST00000410657 292 ntBASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 USP9YP13-201ENST00000417797 480 ntBASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 CYP4F29P-201ENST00000420685 446 ntBASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 AC005517.2-201ENST00000424673 553 ntBASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 UBE2V1P8-201ENST00000437166 265 ntBASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 RPL7P52-201ENST00000449200 742 ntBASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 AC104563.1-201ENST00000476147 376 ntBASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 RN7SL691P-201ENST00000494487 301 ntBASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 KCTD9P2-201ENST00000512203 1013 ntBASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 BNIP3P8-201ENST00000597863 560 ntBASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 AC112191.3-201ENST00000604371 277 ntBASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 AC008250.2-201ENST00000615261 205 ntBASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 MIR6875-201ENST00000617506 72 ntBASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 MIR6075-201ENST00000620782 95 ntBASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 AC040168.1-201ENST00000623594 991 ntBASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 AC112200.1-201ENST00000625015 234 ntBASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 AL359922.3-201ENST00000624779 1670 ntBASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 AL049555.1-201ENST00000562834 1933 ntBASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SLC44A4Q53GD3 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 DHX9P1-201ENST00000436565 3076 ntBASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 SNORD74.4-201ENST00000364129 80 ntBASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 Y_RNA.234-201ENST00000364409 97 ntBASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 Y_RNA.303-201ENST00000364998 94 ntBASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 MIR153-1-201ENST00000384914 90 ntBASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 MT-TC-201ENST00000387405 66 ntBASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 CYCSP19-201ENST00000411715 316 ntBASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 AIMP1P1-201ENST00000418670 937 ntBASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 AL391219.1-201ENST00000422570 483 ntBASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 Z74021.1-201ENST00000423610 407 ntBASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 OR8F1P-201ENST00000425243 930 ntBASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 BTF3P10-201ENST00000433415 495 ntBASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 FAM103A2P-201ENST00000444122 354 ntBASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 AC104651.2-201ENST00000447549 528 ntBASIC4.49□□□□□ -1.69
SLC44A4Q53GD3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms