Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 AC090877.1-201ENST00000561418 344 ntBASIC3.96□□□□□ -1.78
USP41Q3LFD5 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.96□□□□□ -1.78
USP41Q3LFD5 AC010620.1-201ENST00000601088 1102 ntBASIC3.96□□□□□ -1.78
USP41Q3LFD5 RPL23AP92-201ENST00000603609 255 ntBASIC3.96□□□□□ -1.78
USP41Q3LFD5 AC079684.1-201ENST00000621405 437 ntBASIC3.96□□□□□ -1.78
USP41Q3LFD5 AC243312.2-201ENST00000623340 601 ntBASIC3.96□□□□□ -1.78
USP41Q3LFD5 AC026422.1-201ENST00000623961 452 ntBASIC3.96□□□□□ -1.78
USP41Q3LFD5 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.96□□□□□ -1.78
USP41Q3LFD5 AC244258.1-201ENST00000637553 1071 ntBASIC3.96□□□□□ -1.78
USP41Q3LFD5 AC119674.1-207ENST00000641355 633 ntBASIC3.96□□□□□ -1.78
USP41Q3LFD5 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
USP41Q3LFD5 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.95□□□□□ -1.78
USP41Q3LFD5 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
USP41Q3LFD5 AL445523.1-201ENST00000451184 1362 ntBASIC3.95□□□□□ -1.78
USP41Q3LFD5 DDX43P2-201ENST00000604753 1354 ntBASIC3.95□□□□□ -1.78
USP41Q3LFD5 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
USP41Q3LFD5 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
USP41Q3LFD5 RNU6-730P-201ENST00000383954 104 ntBASIC3.95□□□□□ -1.78
USP41Q3LFD5 RNU6-723P-201ENST00000383973 107 ntBASIC3.95□□□□□ -1.78
USP41Q3LFD5 Y_RNA.493-201ENST00000384422 102 ntBASIC3.95□□□□□ -1.78
USP41Q3LFD5 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
USP41Q3LFD5 AL031679.1-201ENST00000400616 525 ntBASIC3.95□□□□□ -1.78
USP41Q3LFD5 MTND4LP20-201ENST00000402379 270 ntBASIC3.95□□□□□ -1.78
USP41Q3LFD5 AL355379.1-201ENST00000405542 640 ntBASIC3.95□□□□□ -1.78
USP41Q3LFD5 MIR1302-8-201ENST00000408342 128 ntBASIC3.95□□□□□ -1.78
USP41Q3LFD5 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.95□□□□□ -1.78
USP41Q3LFD5 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.95□□□□□ -1.78
USP41Q3LFD5 RPS7P15-201ENST00000415804 584 ntBASIC3.95□□□□□ -1.78
USP41Q3LFD5 AC245052.5-201ENST00000416320 649 ntBASIC3.95□□□□□ -1.78
USP41Q3LFD5 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.95□□□□□ -1.78
USP41Q3LFD5 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.95□□□□□ -1.78
USP41Q3LFD5 AC012065.2-201ENST00000421295 375 ntBASIC3.95□□□□□ -1.78
USP41Q3LFD5 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.95□□□□□ -1.78
USP41Q3LFD5 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.95□□□□□ -1.78
USP41Q3LFD5 AC087650.1-201ENST00000431445 468 ntBASIC3.95□□□□□ -1.78
USP41Q3LFD5 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.95□□□□□ -1.78
USP41Q3LFD5 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.95□□□□□ -1.78
USP41Q3LFD5 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.95□□□□□ -1.78
USP41Q3LFD5 CYCSP35-201ENST00000451978 304 ntBASIC3.95□□□□□ -1.78
USP41Q3LFD5 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.95□□□□□ -1.78
USP41Q3LFD5 AC073387.1-201ENST00000453261 709 ntBASIC3.95□□□□□ -1.78
USP41Q3LFD5 AC087312.1-201ENST00000471411 480 ntBASIC3.95□□□□□ -1.78
USP41Q3LFD5 OR5H5P-201ENST00000503164 928 ntBASIC3.95□□□□□ -1.78
USP41Q3LFD5 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.95□□□□□ -1.78
USP41Q3LFD5 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.95□□□□□ -1.78
USP41Q3LFD5 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.95□□□□□ -1.78
USP41Q3LFD5 PTGES3P3-201ENST00000511479 482 ntBASIC3.95□□□□□ -1.78
USP41Q3LFD5 RNU6-1231P-201ENST00000517185 103 ntBASIC3.95□□□□□ -1.78
USP41Q3LFD5 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.95□□□□□ -1.78
USP41Q3LFD5 HSPA8P13-201ENST00000523715 472 ntBASIC3.95□□□□□ -1.78
USP41Q3LFD5 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USP41Q3LFD5 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.95□□□□□ -1.78
USP41Q3LFD5 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.95□□□□□ -1.78
USP41Q3LFD5 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
USP41Q3LFD5 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.95□□□□□ -1.78
USP41Q3LFD5 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.95□□□□□ -1.78
USP41Q3LFD5 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.95□□□□□ -1.78
USP41Q3LFD5 AL161756.2-201ENST00000604597 246 ntBASIC3.95□□□□□ -1.78
USP41Q3LFD5 AC080013.4-201ENST00000607624 649 ntBASIC3.95□□□□□ -1.78
USP41Q3LFD5 AC096577.2-201ENST00000611455 153 ntBASIC3.95□□□□□ -1.78
USP41Q3LFD5 MIR7975-201ENST00000619350 68 ntBASIC3.95□□□□□ -1.78
USP41Q3LFD5 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.95□□□□□ -1.78
USP41Q3LFD5 AC092192.1-201ENST00000633154 1018 ntBASIC3.95□□□□□ -1.78
USP41Q3LFD5 PCMTD1P7-201ENST00000634506 357 ntBASIC3.95□□□□□ -1.78
USP41Q3LFD5 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
USP41Q3LFD5 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USP41Q3LFD5 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
USP41Q3LFD5 AL022578.1-201ENST00000439330 1433 ntBASIC3.95□□□□□ -1.78
USP41Q3LFD5 DCAF13P1-201ENST00000495256 1330 ntBASIC3.95□□□□□ -1.78
USP41Q3LFD5 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.94□□□□□ -1.78
USP41Q3LFD5 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
USP41Q3LFD5 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
USP41Q3LFD5 AC095050.2-201ENST00000510748 1458 ntBASIC3.94□□□□□ -1.78
USP41Q3LFD5 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
USP41Q3LFD5 RPL23AP57-201ENST00000332361 466 ntBASIC3.94□□□□□ -1.78
USP41Q3LFD5 RNU6-462P-201ENST00000362659 105 ntBASIC3.94□□□□□ -1.78
USP41Q3LFD5 RNU6-660P-201ENST00000364566 109 ntBASIC3.94□□□□□ -1.78
USP41Q3LFD5 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
USP41Q3LFD5 RNU6-339P-201ENST00000384310 107 ntBASIC3.94□□□□□ -1.78
USP41Q3LFD5 RN7SKP177-201ENST00000410567 355 ntBASIC3.94□□□□□ -1.78
USP41Q3LFD5 RNU6-920P-201ENST00000410926 92 ntBASIC3.94□□□□□ -1.78
USP41Q3LFD5 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.94□□□□□ -1.78
USP41Q3LFD5 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.94□□□□□ -1.78
USP41Q3LFD5 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.94□□□□□ -1.78
USP41Q3LFD5 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.94□□□□□ -1.78
USP41Q3LFD5 PSMA6P3-201ENST00000428242 164 ntBASIC3.94□□□□□ -1.78
USP41Q3LFD5 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.94□□□□□ -1.78
USP41Q3LFD5 AL159987.2-201ENST00000432754 307 ntBASIC3.94□□□□□ -1.78
USP41Q3LFD5 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.94□□□□□ -1.78
USP41Q3LFD5 HSPE1P28-201ENST00000443139 211 ntBASIC3.94□□□□□ -1.78
USP41Q3LFD5 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.94□□□□□ -1.78
USP41Q3LFD5 ARPC3P5-201ENST00000448802 534 ntBASIC3.94□□□□□ -1.78
USP41Q3LFD5 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.94□□□□□ -1.78
USP41Q3LFD5 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.94□□□□□ -1.78
USP41Q3LFD5 AC012170.1-201ENST00000495139 359 ntBASIC3.94□□□□□ -1.78
USP41Q3LFD5 RPL5P23-201ENST00000496040 868 ntBASIC3.94□□□□□ -1.78
USP41Q3LFD5 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.94□□□□□ -1.78
USP41Q3LFD5 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.94□□□□□ -1.78
USP41Q3LFD5 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.94□□□□□ -1.78
USP41Q3LFD5 TMEM248P1-201ENST00000510579 951 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms