Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.06□□□□□ -2.08
CCL20P78556 AL606834.2-201ENST00000602954 668 ntBASIC2.06□□□□□ -2.08
CCL20P78556 RPL12P50-201ENST00000603116 116 ntBASIC2.06□□□□□ -2.08
CCL20P78556 AC012669.1-201ENST00000603209 283 ntBASIC2.06□□□□□ -2.08
CCL20P78556 HSPE1P7-201ENST00000604681 321 ntBASIC2.06□□□□□ -2.08
CCL20P78556 AC019159.1-201ENST00000605094 187 ntBASIC2.06□□□□□ -2.08
CCL20P78556 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.06□□□□□ -2.08
CCL20P78556 SNHG22-203ENST00000617833 660 ntBASIC2.06□□□□□ -2.08
CCL20P78556 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.06□□□□□ -2.08
CCL20P78556 AC026422.1-201ENST00000623961 452 ntBASIC2.06□□□□□ -2.08
CCL20P78556 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.06□□□□□ -2.08
CCL20P78556 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CCL20P78556 SNORA70.2-201ENST00000364506 135 ntBASIC2.05□□□□□ -2.08
CCL20P78556 SNORD115-48-201ENST00000364764 76 ntBASIC2.05□□□□□ -2.08
CCL20P78556 RNU6-1180P-201ENST00000364935 107 ntBASIC2.05□□□□□ -2.08
CCL20P78556 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.05□□□□□ -2.08
CCL20P78556 RNU1-138P-201ENST00000384093 164 ntBASIC2.05□□□□□ -2.08
CCL20P78556 CYCSP45-201ENST00000402289 315 ntBASIC2.05□□□□□ -2.08
CCL20P78556 METTL5-204ENST00000409340 472 ntTSL 5 BASIC2.05□□□□□ -2.08
CCL20P78556 UBE2V1P11-201ENST00000411559 285 ntBASIC2.05□□□□□ -2.08
CCL20P78556 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.05□□□□□ -2.08
CCL20P78556 AL513477.1-202ENST00000417061 214 ntBASIC2.05□□□□□ -2.08
CCL20P78556 USP9YP20-201ENST00000419224 558 ntBASIC2.05□□□□□ -2.08
CCL20P78556 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.05□□□□□ -2.08
CCL20P78556 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.05□□□□□ -2.08
CCL20P78556 ZNF965P-201ENST00000432501 817 ntBASIC2.05□□□□□ -2.08
CCL20P78556 UBE2V2P3-201ENST00000433562 437 ntBASIC2.05□□□□□ -2.08
CCL20P78556 AC007389.2-201ENST00000434630 306 ntBASIC2.05□□□□□ -2.08
CCL20P78556 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.05□□□□□ -2.08
CCL20P78556 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.05□□□□□ -2.08
CCL20P78556 SNRPGP6-201ENST00000451124 220 ntBASIC2.05□□□□□ -2.08
CCL20P78556 RPL23AP23-201ENST00000452590 471 ntBASIC2.05□□□□□ -2.08
CCL20P78556 RPS20P24-201ENST00000457473 361 ntBASIC2.05□□□□□ -2.08
CCL20P78556 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.05□□□□□ -2.08
CCL20P78556 AC107222.1-201ENST00000510899 637 ntBASIC2.05□□□□□ -2.08
CCL20P78556 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.05□□□□□ -2.08
CCL20P78556 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.05□□□□□ -2.08
CCL20P78556 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.05□□□□□ -2.08
CCL20P78556 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.05□□□□□ -2.08
CCL20P78556 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.05□□□□□ -2.08
CCL20P78556 AC128657.1-201ENST00000549459 145 ntBASIC2.05□□□□□ -2.08
CCL20P78556 AC084824.1-201ENST00000550917 1005 ntBASIC2.05□□□□□ -2.08
CCL20P78556 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.05□□□□□ -2.08
CCL20P78556 ATP5F1P7-201ENST00000567330 760 ntBASIC2.05□□□□□ -2.08
CCL20P78556 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.05□□□□□ -2.08
CCL20P78556 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.05□□□□□ -2.08
CCL20P78556 AC010620.2-201ENST00000600135 313 ntBASIC2.05□□□□□ -2.08
CCL20P78556 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.05□□□□□ -2.08
CCL20P78556 FRG1HP-204ENST00000617940 757 ntBASIC2.05□□□□□ -2.08
CCL20P78556 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.05□□□□□ -2.08
CCL20P78556 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.05□□□□□ -2.08
CCL20P78556 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.05□□□□□ -2.08
CCL20P78556 AC099654.7-201ENST00000635788 2127 ntBASIC2.05□□□□□ -2.08
CCL20P78556 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.05□□□□□ -2.08
CCL20P78556 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
CCL20P78556 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CCL20P78556 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CCL20P78556 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CCL20P78556 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CCL20P78556 SNORA63.1-201ENST00000362493 131 ntBASIC2.04□□□□□ -2.08
CCL20P78556 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CCL20P78556 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC2.04□□□□□ -2.08
CCL20P78556 MIR323B-201ENST00000385269 82 ntBASIC2.04□□□□□ -2.08
CCL20P78556 U3.19-201ENST00000390893 196 ntBASIC2.04□□□□□ -2.08
CCL20P78556 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.04□□□□□ -2.08
CCL20P78556 AL356057.2-201ENST00000403318 432 ntBASIC2.04□□□□□ -2.08
CCL20P78556 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.04□□□□□ -2.08
CCL20P78556 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.04□□□□□ -2.08
CCL20P78556 PNRC2P1-201ENST00000423940 420 ntBASIC2.04□□□□□ -2.08
CCL20P78556 RPL7P37-201ENST00000425095 738 ntBASIC2.04□□□□□ -2.08
CCL20P78556 AC005300.1-201ENST00000428401 373 ntBASIC2.04□□□□□ -2.08
CCL20P78556 HMGN2P31-201ENST00000432430 273 ntBASIC2.04□□□□□ -2.08
CCL20P78556 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.04□□□□□ -2.08
CCL20P78556 RPS20P5-201ENST00000434808 360 ntBASIC2.04□□□□□ -2.08
CCL20P78556 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.04□□□□□ -2.08
CCL20P78556 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.04□□□□□ -2.08
CCL20P78556 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.04□□□□□ -2.08
CCL20P78556 OR6K5P-201ENST00000447050 945 ntBASIC2.04□□□□□ -2.08
CCL20P78556 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.04□□□□□ -2.08
CCL20P78556 AC073901.1-201ENST00000462471 408 ntBASIC2.04□□□□□ -2.08
CCL20P78556 SETP11-201ENST00000473027 690 ntBASIC2.04□□□□□ -2.08
CCL20P78556 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.04□□□□□ -2.08
CCL20P78556 AIG1P1-201ENST00000503376 148 ntBASIC2.04□□□□□ -2.08
CCL20P78556 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CCL20P78556 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.04□□□□□ -2.08
CCL20P78556 MTND4LP31-201ENST00000514859 294 ntBASIC2.04□□□□□ -2.08
CCL20P78556 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.04□□□□□ -2.08
CCL20P78556 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CCL20P78556 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.04□□□□□ -2.08
CCL20P78556 PRELID2P1-201ENST00000552837 301 ntBASIC2.04□□□□□ -2.08
CCL20P78556 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
CCL20P78556 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.04□□□□□ -2.08
CCL20P78556 AC138761.3-201ENST00000579993 334 ntBASIC2.04□□□□□ -2.08
CCL20P78556 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC2.04□□□□□ -2.08
CCL20P78556 AC008739.2-201ENST00000597006 317 ntBASIC2.04□□□□□ -2.08
CCL20P78556 AL645944.1-201ENST00000603857 493 ntBASIC2.04□□□□□ -2.08
CCL20P78556 BNIP3P11-201ENST00000603878 563 ntBASIC2.04□□□□□ -2.08
CCL20P78556 BX322635.1-201ENST00000605804 496 ntBASIC2.04□□□□□ -2.08
CCL20P78556 VN1R7P-201ENST00000619242 903 ntBASIC2.04□□□□□ -2.08
CCL20P78556 AL353748.2-201ENST00000622148 471 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms