Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC010653.1-201ENST00000571108 881 ntBASIC3.38□□□□□ -1.87
CCNA1P78396 VN1R90P-201ENST00000595717 726 ntBASIC3.38□□□□□ -1.87
CCNA1P78396 RPL23AP92-201ENST00000603609 255 ntBASIC3.38□□□□□ -1.87
CCNA1P78396 AL035413.2-201ENST00000604801 525 ntBASIC3.38□□□□□ -1.87
CCNA1P78396 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCNA1P78396 AC020658.4-201ENST00000613987 684 ntBASIC3.38□□□□□ -1.87
CCNA1P78396 AC132825.7-201ENST00000638744 335 ntBASIC3.38□□□□□ -1.87
CCNA1P78396 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.38□□□□□ -1.87
CCNA1P78396 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCNA1P78396 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CCNA1P78396 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CCNA1P78396 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.38□□□□□ -1.87
CCNA1P78396 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.37□□□□□ -1.87
CCNA1P78396 AC010733.2-201ENST00000589496 5702 ntBASIC3.37□□□□□ -1.87
CCNA1P78396 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCNA1P78396 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.37□□□□□ -1.87
CCNA1P78396 CUL1P1-201ENST00000509510 2425 ntBASIC3.37□□□□□ -1.87
CCNA1P78396 RNU6-730P-201ENST00000383954 104 ntBASIC3.37□□□□□ -1.87
CCNA1P78396 RPS4XP8-201ENST00000402039 771 ntBASIC3.37□□□□□ -1.87
CCNA1P78396 TMSB4XP8-201ENST00000402089 135 ntBASIC3.37□□□□□ -1.87
CCNA1P78396 AL121978.1-201ENST00000402778 359 ntBASIC3.37□□□□□ -1.87
CCNA1P78396 RNA5SP31-201ENST00000411144 127 ntBASIC3.37□□□□□ -1.87
CCNA1P78396 TMSB4XP6-201ENST00000415187 135 ntBASIC3.37□□□□□ -1.87
CCNA1P78396 RPL32P35-201ENST00000415214 394 ntBASIC3.37□□□□□ -1.87
CCNA1P78396 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.37□□□□□ -1.87
CCNA1P78396 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.37□□□□□ -1.87
CCNA1P78396 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.37□□□□□ -1.87
CCNA1P78396 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.37□□□□□ -1.87
CCNA1P78396 TMSB4XP1-201ENST00000424567 135 ntBASIC3.37□□□□□ -1.87
CCNA1P78396 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.37□□□□□ -1.87
CCNA1P78396 RPL7P46-201ENST00000425129 740 ntBASIC3.37□□□□□ -1.87
CCNA1P78396 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.37□□□□□ -1.87
CCNA1P78396 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.37□□□□□ -1.87
CCNA1P78396 RPS12P18-201ENST00000442381 270 ntBASIC3.37□□□□□ -1.87
CCNA1P78396 AL929288.2-201ENST00000446368 407 ntBASIC3.37□□□□□ -1.87
CCNA1P78396 FTH1P25-201ENST00000447665 469 ntBASIC3.37□□□□□ -1.87
CCNA1P78396 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.37□□□□□ -1.87
CCNA1P78396 AC104073.1-201ENST00000451988 151 ntBASIC3.37□□□□□ -1.87
CCNA1P78396 AC006539.3-201ENST00000454258 129 ntBASIC3.37□□□□□ -1.87
CCNA1P78396 TRBV26-201ENST00000456572 344 ntBASIC3.37□□□□□ -1.87
CCNA1P78396 AP002884.2-201ENST00000471647 395 ntBASIC3.37□□□□□ -1.87
CCNA1P78396 RN7SL432P-201ENST00000484057 298 ntBASIC3.37□□□□□ -1.87
CCNA1P78396 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCNA1P78396 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCNA1P78396 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCNA1P78396 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCNA1P78396 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCNA1P78396 RNA5SP217-201ENST00000515959 91 ntBASIC3.37□□□□□ -1.87
CCNA1P78396 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.37□□□□□ -1.87
CCNA1P78396 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.37□□□□□ -1.87
CCNA1P78396 HMGB1P6-201ENST00000569046 646 ntBASIC3.37□□□□□ -1.87
CCNA1P78396 BPTFP1-201ENST00000579209 492 ntBASIC3.37□□□□□ -1.87
CCNA1P78396 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.37□□□□□ -1.87
CCNA1P78396 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.37□□□□□ -1.87
CCNA1P78396 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.37□□□□□ -1.87
CCNA1P78396 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.37□□□□□ -1.87
CCNA1P78396 NRBF2P5-201ENST00000603087 788 ntBASIC3.37□□□□□ -1.87
CCNA1P78396 AC024153.1-201ENST00000603103 365 ntBASIC3.37□□□□□ -1.87
CCNA1P78396 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.37□□□□□ -1.87
CCNA1P78396 RMST_10.1-201ENST00000616309 154 ntBASIC3.37□□□□□ -1.87
CCNA1P78396 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.37□□□□□ -1.87
CCNA1P78396 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.37□□□□□ -1.87
CCNA1P78396 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.37□□□□□ -1.87
CCNA1P78396 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.36□□□□□ -1.87
CCNA1P78396 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCNA1P78396 SNORA18.3-201ENST00000384122 132 ntBASIC3.36□□□□□ -1.87
CCNA1P78396 RNU6-1005P-201ENST00000384519 107 ntBASIC3.36□□□□□ -1.87
CCNA1P78396 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.36□□□□□ -1.87
CCNA1P78396 RNA5SP274-201ENST00000410484 108 ntBASIC3.36□□□□□ -1.87
CCNA1P78396 MRPL50P2-201ENST00000416821 482 ntBASIC3.36□□□□□ -1.87
CCNA1P78396 RPS6P14-201ENST00000425165 719 ntBASIC3.36□□□□□ -1.87
CCNA1P78396 MORF4L1P7-201ENST00000426038 703 ntBASIC3.36□□□□□ -1.87
CCNA1P78396 AL009174.1-201ENST00000426577 416 ntBASIC3.36□□□□□ -1.87
CCNA1P78396 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.36□□□□□ -1.87
CCNA1P78396 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.36□□□□□ -1.87
CCNA1P78396 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.36□□□□□ -1.87
CCNA1P78396 AC093392.2-201ENST00000450682 337 ntBASIC3.36□□□□□ -1.87
CCNA1P78396 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCNA1P78396 RPL23AP31-201ENST00000456160 467 ntBASIC3.36□□□□□ -1.87
CCNA1P78396 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.36□□□□□ -1.87
CCNA1P78396 AC089999.1-201ENST00000460336 374 ntBASIC3.36□□□□□ -1.87
CCNA1P78396 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.36□□□□□ -1.87
CCNA1P78396 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.36□□□□□ -1.87
CCNA1P78396 AC017037.2-201ENST00000513850 890 ntBASIC3.36□□□□□ -1.87
CCNA1P78396 AP001207.2-201ENST00000519490 539 ntBASIC3.36□□□□□ -1.87
CCNA1P78396 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCNA1P78396 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.36□□□□□ -1.87
CCNA1P78396 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.36□□□□□ -1.87
CCNA1P78396 MIR3124-201ENST00000582636 67 ntBASIC3.36□□□□□ -1.87
CCNA1P78396 AC007619.2-201ENST00000605743 379 ntBASIC3.36□□□□□ -1.87
CCNA1P78396 AC013412.1-201ENST00000610687 192 ntBASIC3.36□□□□□ -1.87
CCNA1P78396 AC006329.2-201ENST00000611491 394 ntBASIC3.36□□□□□ -1.87
CCNA1P78396 MIR6076-201ENST00000617521 113 ntBASIC3.36□□□□□ -1.87
CCNA1P78396 AC091046.2-201ENST00000620775 665 ntBASIC3.36□□□□□ -1.87
CCNA1P78396 MIR7153-201ENST00000637758 57 ntBASIC3.36□□□□□ -1.87
CCNA1P78396 ZNF663P-202ENST00000641770 1131 ntBASIC3.36□□□□□ -1.87
CCNA1P78396 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCNA1P78396 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCNA1P78396 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.35□□□□□ -1.87
CCNA1P78396 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms