Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC234775.1-201ENST00000454247 670 ntBASIC2.14□□□□□ -2.07
UBA52P62987 HMGB1P25-201ENST00000468402 607 ntBASIC2.14□□□□□ -2.07
UBA52P62987 UBL5P3-201ENST00000475112 231 ntBASIC2.14□□□□□ -2.07
UBA52P62987 ANXA2P1-201ENST00000505539 926 ntBASIC2.14□□□□□ -2.07
UBA52P62987 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.14□□□□□ -2.07
UBA52P62987 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.14□□□□□ -2.07
UBA52P62987 RNU1-41P-201ENST00000516161 162 ntBASIC2.14□□□□□ -2.07
UBA52P62987 RNU1-48P-201ENST00000516400 162 ntBASIC2.14□□□□□ -2.07
UBA52P62987 RPPH1-2P-201ENST00000516688 293 ntBASIC2.14□□□□□ -2.07
UBA52P62987 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.14□□□□□ -2.07
UBA52P62987 NBEAP1-201ENST00000554452 979 ntBASIC2.14□□□□□ -2.07
UBA52P62987 SERPINE4P-201ENST00000554978 281 ntBASIC2.14□□□□□ -2.07
UBA52P62987 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.14□□□□□ -2.07
UBA52P62987 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.14□□□□□ -2.07
UBA52P62987 AC009163.5-201ENST00000575421 637 ntBASIC2.14□□□□□ -2.07
UBA52P62987 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.14□□□□□ -2.07
UBA52P62987 HMGN2P28-201ENST00000606102 262 ntBASIC2.14□□□□□ -2.07
UBA52P62987 AC096586.2-201ENST00000610260 441 ntBASIC2.14□□□□□ -2.07
UBA52P62987 MIR6895-201ENST00000613497 78 ntBASIC2.14□□□□□ -2.07
UBA52P62987 AC140725.3-201ENST00000616193 880 ntBASIC2.14□□□□□ -2.07
UBA52P62987 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.14□□□□□ -2.07
UBA52P62987 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
UBA52P62987 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
UBA52P62987 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.13□□□□□ -2.07
UBA52P62987 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
UBA52P62987 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
UBA52P62987 U8.2-201ENST00000363156 134 ntBASIC2.13□□□□□ -2.07
UBA52P62987 SNORA67.4-201ENST00000384688 142 ntBASIC2.13□□□□□ -2.07
UBA52P62987 EIF5P1-201ENST00000400019 1231 ntBASIC2.13□□□□□ -2.07
UBA52P62987 AL138880.1-201ENST00000405824 642 ntBASIC2.13□□□□□ -2.07
UBA52P62987 ATF1P1-201ENST00000406040 927 ntBASIC2.13□□□□□ -2.07
UBA52P62987 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.13□□□□□ -2.07
UBA52P62987 SMC4P1-201ENST00000414479 527 ntBASIC2.13□□□□□ -2.07
UBA52P62987 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.13□□□□□ -2.07
UBA52P62987 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.13□□□□□ -2.07
UBA52P62987 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.13□□□□□ -2.07
UBA52P62987 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.13□□□□□ -2.07
UBA52P62987 RPL21P66-201ENST00000426566 466 ntBASIC2.13□□□□□ -2.07
UBA52P62987 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.13□□□□□ -2.07
UBA52P62987 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.13□□□□□ -2.07
UBA52P62987 AC133134.1-201ENST00000466800 359 ntBASIC2.13□□□□□ -2.07
UBA52P62987 HMGB1P38-201ENST00000490557 577 ntBASIC2.13□□□□□ -2.07
UBA52P62987 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.13□□□□□ -2.07
UBA52P62987 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.13□□□□□ -2.07
UBA52P62987 RPL7P20-201ENST00000520308 745 ntBASIC2.13□□□□□ -2.07
UBA52P62987 AC087373.1-201ENST00000524920 491 ntBASIC2.13□□□□□ -2.07
UBA52P62987 UBTFL10-201ENST00000528532 562 ntBASIC2.13□□□□□ -2.07
UBA52P62987 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.13□□□□□ -2.07
UBA52P62987 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.13□□□□□ -2.07
UBA52P62987 AC128657.1-201ENST00000549459 145 ntBASIC2.13□□□□□ -2.07
UBA52P62987 AP003117.1-201ENST00000602771 554 ntBASIC2.13□□□□□ -2.07
UBA52P62987 AC025034.2-201ENST00000623264 286 ntBASIC2.13□□□□□ -2.07
UBA52P62987 CTSLP2-204ENST00000629029 392 ntBASIC2.13□□□□□ -2.07
UBA52P62987 AC091564.4-201ENST00000533934 2194 ntBASIC2.13□□□□□ -2.07
UBA52P62987 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
UBA52P62987 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
UBA52P62987 MIRLET7G-201ENST00000362280 84 ntBASIC2.12□□□□□ -2.07
UBA52P62987 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.12□□□□□ -2.07
UBA52P62987 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.12□□□□□ -2.07
UBA52P62987 DEFB109C-201ENST00000382575 264 ntBASIC2.12□□□□□ -2.07
UBA52P62987 DEFB109B-201ENST00000382656 264 ntBASIC2.12□□□□□ -2.07
UBA52P62987 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.12□□□□□ -2.07
UBA52P62987 AC013404.1-201ENST00000413068 249 ntBASIC2.12□□□□□ -2.07
UBA52P62987 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.12□□□□□ -2.07
UBA52P62987 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.12□□□□□ -2.07
UBA52P62987 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.12□□□□□ -2.07
UBA52P62987 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.12□□□□□ -2.07
UBA52P62987 UBE2D3P1-201ENST00000436669 444 ntBASIC2.12□□□□□ -2.07
UBA52P62987 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.12□□□□□ -2.07
UBA52P62987 RPS26P56-201ENST00000444468 240 ntBASIC2.12□□□□□ -2.07
UBA52P62987 AL031659.1-201ENST00000447075 539 ntBASIC2.12□□□□□ -2.07
UBA52P62987 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.12□□□□□ -2.07
UBA52P62987 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC2.12□□□□□ -2.07
UBA52P62987 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC2.12□□□□□ -2.07
UBA52P62987 AC008549.1-201ENST00000512900 643 ntBASIC2.12□□□□□ -2.07
UBA52P62987 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.12□□□□□ -2.07
UBA52P62987 IGLV3-17-201ENST00000519099 244 ntBASIC2.12□□□□□ -2.07
UBA52P62987 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC2.12□□□□□ -2.07
UBA52P62987 AC007115.1-201ENST00000546853 234 ntBASIC2.12□□□□□ -2.07
UBA52P62987 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.12□□□□□ -2.07
UBA52P62987 AL133507.1-201ENST00000605269 557 ntBASIC2.12□□□□□ -2.07
UBA52P62987 AL355816.1-201ENST00000607951 118 ntBASIC2.12□□□□□ -2.07
UBA52P62987 AC019131.2-201ENST00000609071 870 ntBASIC2.12□□□□□ -2.07
UBA52P62987 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
UBA52P62987 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
UBA52P62987 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
UBA52P62987 AC093536.2-201ENST00000565257 1406 ntBASIC2.11□□□□□ -2.07
UBA52P62987 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
UBA52P62987 PABPC1P9-201ENST00000426076 1612 ntBASIC2.11□□□□□ -2.07
UBA52P62987 AL139276.1-201ENST00000311910 1001 ntBASIC2.11□□□□□ -2.07
UBA52P62987 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
UBA52P62987 SNORD62.1-201ENST00000362541 86 ntBASIC2.11□□□□□ -2.07
UBA52P62987 RNU6-335P-201ENST00000364563 113 ntBASIC2.11□□□□□ -2.07
UBA52P62987 RNU6-1180P-201ENST00000364935 107 ntBASIC2.11□□□□□ -2.07
UBA52P62987 RPS4XP7-201ENST00000406274 780 ntBASIC2.11□□□□□ -2.07
UBA52P62987 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.11□□□□□ -2.07
UBA52P62987 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.11□□□□□ -2.07
UBA52P62987 HMGN2P30-201ENST00000423237 256 ntBASIC2.11□□□□□ -2.07
UBA52P62987 MTATP6P4-201ENST00000427725 675 ntBASIC2.11□□□□□ -2.07
UBA52P62987 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms