Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RPS3AP61247 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RPS3AP61247 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.81□□□□□ -1.8
RPS3AP61247 LARP1BP1-201ENST00000506036 1359 ntBASIC3.81□□□□□ -1.8
RPS3AP61247 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RPS3AP61247 RNU6-50P-201ENST00000362356 103 ntBASIC3.81□□□□□ -1.8
RPS3AP61247 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RPS3AP61247 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.81□□□□□ -1.8
RPS3AP61247 SNORD116-8-201ENST00000384365 95 ntBASIC3.81□□□□□ -1.8
RPS3AP61247 Y_RNA.560-201ENST00000384689 102 ntBASIC3.81□□□□□ -1.8
RPS3AP61247 AL136372.1-201ENST00000403060 228 ntBASIC3.81□□□□□ -1.8
RPS3AP61247 AL031577.2-201ENST00000404133 280 ntBASIC3.81□□□□□ -1.8
RPS3AP61247 RNA5SP129-201ENST00000410276 118 ntBASIC3.81□□□□□ -1.8
RPS3AP61247 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.81□□□□□ -1.8
RPS3AP61247 SSXP9-201ENST00000417503 292 ntBASIC3.81□□□□□ -1.8
RPS3AP61247 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.81□□□□□ -1.8
RPS3AP61247 COX6B1P7-201ENST00000430845 235 ntBASIC3.81□□□□□ -1.8
RPS3AP61247 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.81□□□□□ -1.8
RPS3AP61247 BTF3P10-201ENST00000433415 495 ntBASIC3.81□□□□□ -1.8
RPS3AP61247 CYCSP43-201ENST00000438233 310 ntBASIC3.81□□□□□ -1.8
RPS3AP61247 AL445567.1-201ENST00000439121 144 ntBASIC3.81□□□□□ -1.8
RPS3AP61247 AC114755.5-201ENST00000447760 831 ntBASIC3.81□□□□□ -1.8
RPS3AP61247 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.81□□□□□ -1.8
RPS3AP61247 AC097262.1-201ENST00000452559 548 ntBASIC3.81□□□□□ -1.8
RPS3AP61247 RPL23AP31-201ENST00000456160 467 ntBASIC3.81□□□□□ -1.8
RPS3AP61247 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.81□□□□□ -1.8
RPS3AP61247 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.81□□□□□ -1.8
RPS3AP61247 RPS4XP15-201ENST00000489210 795 ntBASIC3.81□□□□□ -1.8
RPS3AP61247 SNORA31.8-201ENST00000516327 108 ntBASIC3.81□□□□□ -1.8
RPS3AP61247 RNA5SP468-201ENST00000516782 93 ntBASIC3.81□□□□□ -1.8
RPS3AP61247 MIR2116-201ENST00000517221 80 ntBASIC3.81□□□□□ -1.8
RPS3AP61247 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.81□□□□□ -1.8
RPS3AP61247 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.81□□□□□ -1.8
RPS3AP61247 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.81□□□□□ -1.8
RPS3AP61247 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.81□□□□□ -1.8
RPS3AP61247 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.81□□□□□ -1.8
RPS3AP61247 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RPS3AP61247 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.81□□□□□ -1.8
RPS3AP61247 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.81□□□□□ -1.8
RPS3AP61247 ZNF192P1-203ENST00000565888 810 ntBASIC3.81□□□□□ -1.8
RPS3AP61247 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.81□□□□□ -1.8
RPS3AP61247 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.81□□□□□ -1.8
RPS3AP61247 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.81□□□□□ -1.8
RPS3AP61247 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.81□□□□□ -1.8
RPS3AP61247 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.81□□□□□ -1.8
RPS3AP61247 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.81□□□□□ -1.8
RPS3AP61247 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RPS3AP61247 AC012443.1-201ENST00000605605 231 ntBASIC3.81□□□□□ -1.8
RPS3AP61247 AL158211.4-201ENST00000606988 584 ntBASIC3.81□□□□□ -1.8
RPS3AP61247 AC090425.2-201ENST00000608818 501 ntBASIC3.81□□□□□ -1.8
RPS3AP61247 AC128687.2-201ENST00000609657 566 ntBASIC3.81□□□□□ -1.8
RPS3AP61247 AC007546.1-201ENST00000619452 559 ntBASIC3.81□□□□□ -1.8
RPS3AP61247 AF246928.1-201ENST00000623768 87 ntBASIC3.81□□□□□ -1.8
RPS3AP61247 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.81□□□□□ -1.8
RPS3AP61247 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RPS3AP61247 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RPS3AP61247 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RPS3AP61247 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RPS3AP61247 AL445523.1-201ENST00000451184 1362 ntBASIC3.8□□□□□ -1.8
RPS3AP61247 RNY4P24-201ENST00000362735 96 ntBASIC3.8□□□□□ -1.8
RPS3AP61247 RNU6-501P-201ENST00000364072 100 ntBASIC3.8□□□□□ -1.8
RPS3AP61247 RNU6-1078P-201ENST00000364522 103 ntBASIC3.8□□□□□ -1.8
RPS3AP61247 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RPS3AP61247 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.8□□□□□ -1.8
RPS3AP61247 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.8□□□□□ -1.8
RPS3AP61247 AC025750.1-201ENST00000399891 379 ntBASIC3.8□□□□□ -1.8
RPS3AP61247 RNU6-920P-201ENST00000410926 92 ntBASIC3.8□□□□□ -1.8
RPS3AP61247 Z99497.1-201ENST00000421282 135 ntBASIC3.8□□□□□ -1.8
RPS3AP61247 RPS27AP14-201ENST00000422868 454 ntBASIC3.8□□□□□ -1.8
RPS3AP61247 RSL24D1P6-201ENST00000426934 401 ntBASIC3.8□□□□□ -1.8
RPS3AP61247 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.8□□□□□ -1.8
RPS3AP61247 AC087650.1-201ENST00000431445 468 ntBASIC3.8□□□□□ -1.8
RPS3AP61247 FAM103A2P-201ENST00000444122 354 ntBASIC3.8□□□□□ -1.8
RPS3AP61247 RAC1P7-201ENST00000445367 377 ntBASIC3.8□□□□□ -1.8
RPS3AP61247 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.8□□□□□ -1.8
RPS3AP61247 RPS17P13-201ENST00000448974 407 ntBASIC3.8□□□□□ -1.8
RPS3AP61247 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.8□□□□□ -1.8
RPS3AP61247 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.8□□□□□ -1.8
RPS3AP61247 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
RPS3AP61247 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.8□□□□□ -1.8
RPS3AP61247 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
RPS3AP61247 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.8□□□□□ -1.8
RPS3AP61247 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.8□□□□□ -1.8
RPS3AP61247 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.8□□□□□ -1.8
RPS3AP61247 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.8□□□□□ -1.8
RPS3AP61247 AC099522.1-202ENST00000514718 367 ntBASIC3.8□□□□□ -1.8
RPS3AP61247 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.8□□□□□ -1.8
RPS3AP61247 MTCO1P47-201ENST00000523889 1271 ntBASIC3.8□□□□□ -1.8
RPS3AP61247 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.8□□□□□ -1.8
RPS3AP61247 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.8□□□□□ -1.8
RPS3AP61247 AC105233.3-201ENST00000531125 744 ntBASIC3.8□□□□□ -1.8
RPS3AP61247 CYCSP29-201ENST00000533731 318 ntBASIC3.8□□□□□ -1.8
RPS3AP61247 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.8□□□□□ -1.8
RPS3AP61247 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.8□□□□□ -1.8
RPS3AP61247 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.8□□□□□ -1.8
RPS3AP61247 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.8□□□□□ -1.8
RPS3AP61247 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.8□□□□□ -1.8
RPS3AP61247 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.8□□□□□ -1.8
RPS3AP61247 AP001429.1-201ENST00000602568 530 ntBASIC3.8□□□□□ -1.8
RPS3AP61247 AP001330.4-201ENST00000604350 154 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms