Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF144AP50876 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RNF144AP50876 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RNF144AP50876 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF144AP50876 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RNF144AP50876 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
RNF144AP50876 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF144AP50876 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF144AP50876 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF144AP50876 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF144AP50876 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
RNF144AP50876 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF144AP50876 Y_RNA.122-201ENST00000363331 96 ntBASIC5.58□□□□□ -1.52
RNF144AP50876 RNU6-708P-201ENST00000384217 107 ntBASIC5.58□□□□□ -1.52
RNF144AP50876 AL590704.1-201ENST00000402856 794 ntBASIC5.58□□□□□ -1.52
RNF144AP50876 RN7SKP17-201ENST00000411242 351 ntBASIC5.58□□□□□ -1.52
RNF144AP50876 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
RNF144AP50876 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF144AP50876 AC006946.1-201ENST00000429106 328 ntBASIC5.58□□□□□ -1.52
RNF144AP50876 RPL12P18-201ENST00000437175 325 ntBASIC5.58□□□□□ -1.52
RNF144AP50876 HMGN1P2-201ENST00000445197 310 ntBASIC5.58□□□□□ -1.52
RNF144AP50876 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RNF144AP50876 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.58□□□□□ -1.52
RNF144AP50876 PPIAP7-201ENST00000454070 489 ntBASIC5.58□□□□□ -1.52
RNF144AP50876 AL136097.1-201ENST00000456945 913 ntBASIC5.58□□□□□ -1.52
RNF144AP50876 ACA64.4-201ENST00000459070 127 ntBASIC5.58□□□□□ -1.52
RNF144AP50876 RN7SL352P-201ENST00000466002 277 ntBASIC5.58□□□□□ -1.52
RNF144AP50876 RN7SL717P-201ENST00000478343 297 ntBASIC5.58□□□□□ -1.52
RNF144AP50876 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.58□□□□□ -1.52
RNF144AP50876 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC5.58□□□□□ -1.52
RNF144AP50876 RN7SKP82-201ENST00000516786 223 ntBASIC5.58□□□□□ -1.52
RNF144AP50876 Y_RNA.713-201ENST00000517013 96 ntBASIC5.58□□□□□ -1.52
RNF144AP50876 RN7SKP183-201ENST00000517169 324 ntBASIC5.58□□□□□ -1.52
RNF144AP50876 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.58□□□□□ -1.52
RNF144AP50876 AP006587.4-201ENST00000526053 529 ntBASIC5.58□□□□□ -1.52
RNF144AP50876 AP000620.1-201ENST00000527147 504 ntBASIC5.58□□□□□ -1.52
RNF144AP50876 HIGD1AP5-201ENST00000529959 259 ntBASIC5.58□□□□□ -1.52
RNF144AP50876 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RNF144AP50876 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF144AP50876 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.58□□□□□ -1.52
RNF144AP50876 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC5.58□□□□□ -1.52
RNF144AP50876 OR1F2P-201ENST00000570470 933 ntBASIC5.58□□□□□ -1.52
RNF144AP50876 TXNP4-201ENST00000575018 310 ntBASIC5.58□□□□□ -1.52
RNF144AP50876 MIR3154-201ENST00000577829 84 ntBASIC5.58□□□□□ -1.52
RNF144AP50876 MIR4502-201ENST00000580432 81 ntBASIC5.58□□□□□ -1.52
RNF144AP50876 OR1M4P-201ENST00000589199 287 ntBASIC5.58□□□□□ -1.52
RNF144AP50876 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF144AP50876 SNORA74.4-201ENST00000607595 199 ntBASIC5.58□□□□□ -1.52
RNF144AP50876 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.58□□□□□ -1.52
RNF144AP50876 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF144AP50876 FP236240.3-201ENST00000623061 327 ntBASIC5.58□□□□□ -1.52
RNF144AP50876 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF144AP50876 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
RNF144AP50876 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.58□□□□□ -1.52
RNF144AP50876 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RNF144AP50876 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF144AP50876 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RNF144AP50876 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RNF144AP50876 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF144AP50876 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
RNF144AP50876 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RNF144AP50876 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF144AP50876 AC009951.1-201ENST00000623674 2614 ntBASIC5.58□□□□□ -1.52
RNF144AP50876 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF144AP50876 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RNF144AP50876 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.57□□□□□ -1.52
RNF144AP50876 AC025470.1-201ENST00000510053 2032 ntBASIC5.57□□□□□ -1.52
RNF144AP50876 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF144AP50876 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF144AP50876 snoU2_19.2-201ENST00000363024 80 ntBASIC5.57□□□□□ -1.52
RNF144AP50876 Y_RNA.199-201ENST00000364014 102 ntBASIC5.57□□□□□ -1.52
RNF144AP50876 RNU6-933P-201ENST00000384424 107 ntBASIC5.57□□□□□ -1.52
RNF144AP50876 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.57□□□□□ -1.52
RNF144AP50876 RPS15AP6-201ENST00000420703 385 ntBASIC5.57□□□□□ -1.52
RNF144AP50876 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.57□□□□□ -1.52
RNF144AP50876 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.57□□□□□ -1.52
RNF144AP50876 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF144AP50876 CYCSP12-201ENST00000437729 300 ntBASIC5.57□□□□□ -1.52
RNF144AP50876 CYCSP43-201ENST00000438233 310 ntBASIC5.57□□□□□ -1.52
RNF144AP50876 RPL23AP33-201ENST00000442301 452 ntBASIC5.57□□□□□ -1.52
RNF144AP50876 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.57□□□□□ -1.52
RNF144AP50876 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.57□□□□□ -1.52
RNF144AP50876 FTH1P24-201ENST00000503502 462 ntBASIC5.57□□□□□ -1.52
RNF144AP50876 AC008958.1-201ENST00000511047 682 ntBASIC5.57□□□□□ -1.52
RNF144AP50876 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF144AP50876 RN7SKP238-201ENST00000516483 249 ntBASIC5.57□□□□□ -1.52
RNF144AP50876 RN7SKP60-201ENST00000516985 239 ntBASIC5.57□□□□□ -1.52
RNF144AP50876 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.57□□□□□ -1.52
RNF144AP50876 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.57□□□□□ -1.52
RNF144AP50876 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF144AP50876 CBX3P4-201ENST00000538909 354 ntBASIC5.57□□□□□ -1.52
RNF144AP50876 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF144AP50876 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF144AP50876 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.57□□□□□ -1.52
RNF144AP50876 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.57□□□□□ -1.52
RNF144AP50876 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF144AP50876 AC068790.4-201ENST00000602474 263 ntBASIC5.57□□□□□ -1.52
RNF144AP50876 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.57□□□□□ -1.52
RNF144AP50876 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.57□□□□□ -1.52
RNF144AP50876 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms