Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC092798.1-201ENST00000458542 409 ntBASIC2.16□□□□□ -2.06
HTTP42858 AC117532.1-201ENST00000514638 323 ntBASIC2.16□□□□□ -2.06
HTTP42858 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.16□□□□□ -2.06
HTTP42858 CBX3P4-201ENST00000538909 354 ntBASIC2.16□□□□□ -2.06
HTTP42858 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.16□□□□□ -2.06
HTTP42858 AC244517.12-201ENST00000623581 663 ntBASIC2.16□□□□□ -2.06
HTTP42858 API5P2-201ENST00000397055 1498 ntBASIC2.16□□□□□ -2.06
HTTP42858 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
HTTP42858 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
HTTP42858 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
HTTP42858 Y_RNA.205-201ENST00000364128 113 ntBASIC2.16□□□□□ -2.06
HTTP42858 RNU6-1-201ENST00000383898 107 ntBASIC2.16□□□□□ -2.06
HTTP42858 RNU6-356P-201ENST00000384140 107 ntBASIC2.16□□□□□ -2.06
HTTP42858 RNU6-42P-201ENST00000384165 107 ntBASIC2.16□□□□□ -2.06
HTTP42858 RNU6-36P-201ENST00000384172 107 ntBASIC2.16□□□□□ -2.06
HTTP42858 RNU6-4P-201ENST00000384205 107 ntBASIC2.16□□□□□ -2.06
HTTP42858 RNU6-5P-201ENST00000384238 107 ntBASIC2.16□□□□□ -2.06
HTTP42858 RNU6-3P-201ENST00000384314 107 ntBASIC2.16□□□□□ -2.06
HTTP42858 RNU6-2-201ENST00000384627 107 ntBASIC2.16□□□□□ -2.06
HTTP42858 RNU6-9-201ENST00000384776 107 ntBASIC2.16□□□□□ -2.06
HTTP42858 RNU6-33P-201ENST00000384793 107 ntBASIC2.16□□□□□ -2.06
HTTP42858 SAR1AP2-201ENST00000392696 594 ntBASIC2.16□□□□□ -2.06
HTTP42858 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC2.16□□□□□ -2.06
HTTP42858 AL160237.3-201ENST00000604114 1013 ntBASIC2.16□□□□□ -2.06
HTTP42858 RNU6-6P-201ENST00000606623 107 ntBASIC2.16□□□□□ -2.06
HTTP42858 AC002076.2-201ENST00000617362 122 ntBASIC2.16□□□□□ -2.06
HTTP42858 AC084768.2-201ENST00000622736 221 ntBASIC2.16□□□□□ -2.06
HTTP42858 AC000123.3-201ENST00000624029 4975 ntBASIC2.16□□□□□ -2.06
HTTP42858 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.15□□□□□ -2.06
HTTP42858 EXOC5P1-201ENST00000510543 1969 ntBASIC2.15□□□□□ -2.06
HTTP42858 OR6C64P-201ENST00000419708 825 ntBASIC2.15□□□□□ -2.06
HTTP42858 AC034244.1-201ENST00000507687 207 ntBASIC2.15□□□□□ -2.06
HTTP42858 RNA5SP220-201ENST00000516298 104 ntBASIC2.15□□□□□ -2.06
HTTP42858 AC067805.1-201ENST00000559344 470 ntBASIC2.15□□□□□ -2.06
HTTP42858 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
HTTP42858 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
HTTP42858 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.15□□□□□ -2.06
HTTP42858 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
HTTP42858 AL445685.2-201ENST00000422551 342 ntBASIC2.15□□□□□ -2.07
HTTP42858 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.15□□□□□ -2.07
HTTP42858 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.15□□□□□ -2.07
HTTP42858 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.15□□□□□ -2.07
HTTP42858 AP000852.1-201ENST00000472460 573 ntBASIC2.15□□□□□ -2.07
HTTP42858 AC092991.1-201ENST00000477176 376 ntBASIC2.15□□□□□ -2.07
HTTP42858 HMGB1P1-201ENST00000522557 636 ntBASIC2.15□□□□□ -2.07
HTTP42858 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.15□□□□□ -2.07
HTTP42858 AC069234.5-201ENST00000611056 416 ntBASIC2.15□□□□□ -2.07
HTTP42858 AL450489.1-201ENST00000612071 468 ntBASIC2.15□□□□□ -2.07
HTTP42858 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC2.15□□□□□ -2.07
HTTP42858 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
HTTP42858 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.15□□□□□ -2.07
HTTP42858 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC2.15□□□□□ -2.07
HTTP42858 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
HTTP42858 AC019129.1-201ENST00000403786 261 ntBASIC2.15□□□□□ -2.07
HTTP42858 MIR1294-201ENST00000408503 142 ntBASIC2.15□□□□□ -2.07
HTTP42858 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.15□□□□□ -2.07
HTTP42858 MTND4LP16-201ENST00000440828 295 ntBASIC2.15□□□□□ -2.07
HTTP42858 IGLVIV-53-201ENST00000520107 367 ntBASIC2.15□□□□□ -2.07
HTTP42858 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.15□□□□□ -2.07
HTTP42858 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.15□□□□□ -2.07
HTTP42858 AL731537.2-201ENST00000561565 951 ntBASIC2.15□□□□□ -2.07
HTTP42858 PSMA6P4-201ENST00000603247 718 ntBASIC2.15□□□□□ -2.07
HTTP42858 AC097634.1-201ENST00000604491 2467 ntBASIC2.15□□□□□ -2.07
HTTP42858 RPL23AP14-201ENST00000468281 468 ntBASIC2.14□□□□□ -2.07
HTTP42858 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC2.14□□□□□ -2.07
HTTP42858 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.14□□□□□ -2.07
HTTP42858 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.14□□□□□ -2.07
HTTP42858 MIR5089-201ENST00000580047 84 ntBASIC2.14□□□□□ -2.07
HTTP42858 LRRC37A5P-203ENST00000580181 585 ntBASIC2.14□□□□□ -2.07
HTTP42858 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC2.14□□□□□ -2.07
HTTP42858 AC013562.2-201ENST00000611632 603 ntBASIC2.14□□□□□ -2.07
HTTP42858 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.14□□□□□ -2.07
HTTP42858 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.14□□□□□ -2.07
HTTP42858 PROS2P-201ENST00000474651 1951 ntBASIC2.14□□□□□ -2.07
HTTP42858 SCN1A-220ENST00000641603 12506 ntBASIC2.14□□□□□ -2.07
HTTP42858 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
HTTP42858 SET-203ENST00000372688 801 ntTSL 2 BASIC2.14□□□□□ -2.07
HTTP42858 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.14□□□□□ -2.07
HTTP42858 NAMPTP2-201ENST00000505629 1115 ntBASIC2.14□□□□□ -2.07
HTTP42858 AC007620.3-201ENST00000608131 497 ntBASIC2.14□□□□□ -2.07
HTTP42858 AC093311.1-201ENST00000506586 2021 ntBASIC2.14□□□□□ -2.07
HTTP42858 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.14□□□□□ -2.07
HTTP42858 MTND5P35-201ENST00000557537 1720 ntBASIC2.14□□□□□ -2.07
HTTP42858 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
HTTP42858 AL137159.1-201ENST00000452808 512 ntBASIC2.13□□□□□ -2.07
HTTP42858 RNU1-123P-201ENST00000458950 160 ntBASIC2.13□□□□□ -2.07
HTTP42858 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HTTP42858 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.13□□□□□ -2.07
HTTP42858 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HTTP42858 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
HTTP42858 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
HTTP42858 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.13□□□□□ -2.07
HTTP42858 AL023807.1-201ENST00000407932 359 ntBASIC2.13□□□□□ -2.07
HTTP42858 USP9YP8-201ENST00000441913 500 ntBASIC2.13□□□□□ -2.07
HTTP42858 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.13□□□□□ -2.07
HTTP42858 AL512598.1-201ENST00000610158 273 ntBASIC2.13□□□□□ -2.07
HTTP42858 MIR6515-201ENST00000619843 57 ntBASIC2.13□□□□□ -2.07
HTTP42858 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.13□□□□□ -2.07
HTTP42858 AC107021.2-201ENST00000567714 2095 ntBASIC2.13□□□□□ -2.07
HTTP42858 Y_RNA.354-201ENST00000365448 111 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms