Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 Y_RNA.164-201ENST00000363709 102 ntBASIC2.91□□□□□ -1.94
SCN4AP35499 NPM1P10-201ENST00000398310 865 ntBASIC2.91□□□□□ -1.94
SCN4AP35499 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SCN4AP35499 AL590004.2-201ENST00000404787 371 ntBASIC2.91□□□□□ -1.94
SCN4AP35499 SNORD88.1-201ENST00000408684 91 ntBASIC2.91□□□□□ -1.94
SCN4AP35499 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC2.91□□□□□ -1.94
SCN4AP35499 TRIAP1P1-201ENST00000427062 225 ntBASIC2.91□□□□□ -1.94
SCN4AP35499 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.91□□□□□ -1.94
SCN4AP35499 AP002345.1-201ENST00000456493 928 ntBASIC2.91□□□□□ -1.94
SCN4AP35499 TRBV1-201ENST00000476502 284 ntBASIC2.91□□□□□ -1.94
SCN4AP35499 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.91□□□□□ -1.94
SCN4AP35499 MTND4P2-201ENST00000507767 1203 ntBASIC2.91□□□□□ -1.94
SCN4AP35499 AC116337.1-201ENST00000509680 687 ntBASIC2.91□□□□□ -1.94
SCN4AP35499 HAUS1P3-201ENST00000523909 662 ntBASIC2.91□□□□□ -1.94
SCN4AP35499 AC128657.1-201ENST00000549459 145 ntBASIC2.91□□□□□ -1.94
SCN4AP35499 AC025918.2-201ENST00000558683 763 ntBASIC2.91□□□□□ -1.94
SCN4AP35499 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SCN4AP35499 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
SCN4AP35499 TAF9BP2-201ENST00000400856 499 ntBASIC2.9□□□□□ -1.95
SCN4AP35499 RPL36AP6-201ENST00000435770 321 ntBASIC2.9□□□□□ -1.95
SCN4AP35499 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.9□□□□□ -1.95
SCN4AP35499 AC114878.1-201ENST00000441166 358 ntBASIC2.9□□□□□ -1.95
SCN4AP35499 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.9□□□□□ -1.95
SCN4AP35499 RPL36AP51-201ENST00000487216 318 ntBASIC2.9□□□□□ -1.95
SCN4AP35499 AC104090.1-201ENST00000506341 1171 ntBASIC2.9□□□□□ -1.95
SCN4AP35499 SNRPGP1-201ENST00000553864 222 ntBASIC2.9□□□□□ -1.95
SCN4AP35499 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.9□□□□□ -1.95
SCN4AP35499 LINC00557-201ENST00000563184 1279 ntBASIC2.9□□□□□ -1.95
SCN4AP35499 MTND4LP24-201ENST00000572277 291 ntBASIC2.9□□□□□ -1.95
SCN4AP35499 MIR4512-201ENST00000583257 77 ntBASIC2.9□□□□□ -1.95
SCN4AP35499 AC012531.5-201ENST00000611375 151 ntBASIC2.9□□□□□ -1.95
SCN4AP35499 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC2.9□□□□□ -1.95
SCN4AP35499 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
SCN4AP35499 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC2.9□□□□□ -1.95
SCN4AP35499 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SCN4AP35499 MTCO1P14-201ENST00000441695 1559 ntBASIC2.9□□□□□ -1.95
SCN4AP35499 MTND5P6-201ENST00000422338 1798 ntBASIC2.9□□□□□ -1.95
SCN4AP35499 RNU6-31P-201ENST00000384388 108 ntBASIC2.89□□□□□ -1.95
SCN4AP35499 RN7SKP140-201ENST00000411196 284 ntBASIC2.89□□□□□ -1.95
SCN4AP35499 RNU6-603P-201ENST00000411403 107 ntBASIC2.89□□□□□ -1.95
SCN4AP35499 MORF4L1P7-201ENST00000426038 703 ntBASIC2.89□□□□□ -1.95
SCN4AP35499 FO393419.3-201ENST00000428741 282 ntBASIC2.89□□□□□ -1.95
SCN4AP35499 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.89□□□□□ -1.95
SCN4AP35499 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.89□□□□□ -1.95
SCN4AP35499 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.89□□□□□ -1.95
SCN4AP35499 SNORA31.1-201ENST00000515993 133 ntBASIC2.89□□□□□ -1.95
SCN4AP35499 SNORA31.5-201ENST00000516190 133 ntBASIC2.89□□□□□ -1.95
SCN4AP35499 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SCN4AP35499 AC110792.4-201ENST00000609843 298 ntBASIC2.89□□□□□ -1.95
SCN4AP35499 AC003001.2-201ENST00000616294 831 ntBASIC2.89□□□□□ -1.95
SCN4AP35499 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.89□□□□□ -1.95
SCN4AP35499 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.89□□□□□ -1.95
SCN4AP35499 AL163152.1-201ENST00000642001 374 ntBASIC2.89□□□□□ -1.95
SCN4AP35499 AP001148.1-201ENST00000624124 2359 ntBASIC2.89□□□□□ -1.95
SCN4AP35499 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SCN4AP35499 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC2.89□□□□□ -1.95
SCN4AP35499 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SCN4AP35499 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
SCN4AP35499 MIR142-201ENST00000384835 87 ntBASIC2.89□□□□□ -1.95
SCN4AP35499 NCSTNP1-201ENST00000406229 144 ntBASIC2.89□□□□□ -1.95
SCN4AP35499 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.89□□□□□ -1.95
SCN4AP35499 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.89□□□□□ -1.95
SCN4AP35499 AC099336.2-201ENST00000422457 254 ntBASIC2.89□□□□□ -1.95
SCN4AP35499 SEC63P1-201ENST00000425785 1258 ntBASIC2.89□□□□□ -1.95
SCN4AP35499 RPS24P8-201ENST00000431490 402 ntBASIC2.89□□□□□ -1.95
SCN4AP35499 Z98742.2-201ENST00000431564 187 ntBASIC2.89□□□□□ -1.95
SCN4AP35499 RN7SKP210-201ENST00000459176 261 ntBASIC2.89□□□□□ -1.95
SCN4AP35499 AC025459.1-201ENST00000504072 156 ntBASIC2.89□□□□□ -1.95
SCN4AP35499 RNA5SP281-201ENST00000516504 135 ntBASIC2.89□□□□□ -1.95
SCN4AP35499 RNU6-347P-201ENST00000516658 105 ntBASIC2.89□□□□□ -1.95
SCN4AP35499 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC2.89□□□□□ -1.95
SCN4AP35499 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.89□□□□□ -1.95
SCN4AP35499 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.89□□□□□ -1.95
SCN4AP35499 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC2.89□□□□□ -1.95
SCN4AP35499 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.89□□□□□ -1.95
SCN4AP35499 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.89□□□□□ -1.95
SCN4AP35499 AC084035.1-201ENST00000634543 607 ntBASIC2.89□□□□□ -1.95
SCN4AP35499 AL512643.1-201ENST00000635735 524 ntBASIC2.89□□□□□ -1.95
SCN4AP35499 CRYM-AS1-204ENST00000637983 556 ntBASIC2.89□□□□□ -1.95
SCN4AP35499 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SCN4AP35499 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SCN4AP35499 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SCN4AP35499 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SCN4AP35499 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SCN4AP35499 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SCN4AP35499 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
SCN4AP35499 MIR181A2-201ENST00000384863 110 ntBASIC2.88□□□□□ -1.95
SCN4AP35499 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SCN4AP35499 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SCN4AP35499 RNA5SP344-201ENST00000411081 104 ntBASIC2.88□□□□□ -1.95
SCN4AP35499 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SCN4AP35499 MED6P1-201ENST00000439659 713 ntBASIC2.88□□□□□ -1.95
SCN4AP35499 RPS27P5-201ENST00000444247 244 ntBASIC2.88□□□□□ -1.95
SCN4AP35499 AC022431.1-201ENST00000450941 438 ntBASIC2.88□□□□□ -1.95
SCN4AP35499 AC126182.1-201ENST00000478134 357 ntBASIC2.88□□□□□ -1.95
SCN4AP35499 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.88□□□□□ -1.95
SCN4AP35499 AC090543.1-201ENST00000492168 485 ntBASIC2.88□□□□□ -1.95
SCN4AP35499 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SCN4AP35499 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.88□□□□□ -1.95
SCN4AP35499 AC008083.2-201ENST00000546707 476 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms