Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AC083760.1-201ENST00000589621 670 ntBASIC3.55□□□□□ -1.84
USP6P35125 AC006116.7-201ENST00000590141 756 ntBASIC3.55□□□□□ -1.84
USP6P35125 AL158827.2-201ENST00000602494 330 ntBASIC3.55□□□□□ -1.84
USP6P35125 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.55□□□□□ -1.84
USP6P35125 AC022079.2-201ENST00000619739 566 ntBASIC3.55□□□□□ -1.84
USP6P35125 AL138955.1-201ENST00000622881 1040 ntBASIC3.55□□□□□ -1.84
USP6P35125 AL691447.3-201ENST00000635020 330 ntBASIC3.55□□□□□ -1.84
USP6P35125 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.55□□□□□ -1.84
USP6P35125 AC025263.3-201ENST00000622965 1396 ntBASIC3.55□□□□□ -1.84
USP6P35125 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
USP6P35125 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
USP6P35125 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
USP6P35125 AC008725.1-201ENST00000605123 2263 ntBASIC3.55□□□□□ -1.84
USP6P35125 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.54□□□□□ -1.84
USP6P35125 RNU6-984P-201ENST00000363236 109 ntBASIC3.54□□□□□ -1.84
USP6P35125 RNU6-353P-201ENST00000364266 108 ntBASIC3.54□□□□□ -1.84
USP6P35125 RNU6-272P-201ENST00000411028 104 ntBASIC3.54□□□□□ -1.84
USP6P35125 RPLP0P7-201ENST00000416050 667 ntBASIC3.54□□□□□ -1.84
USP6P35125 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.54□□□□□ -1.84
USP6P35125 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.54□□□□□ -1.84
USP6P35125 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.54□□□□□ -1.84
USP6P35125 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.54□□□□□ -1.84
USP6P35125 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.54□□□□□ -1.84
USP6P35125 CACYBPP2-201ENST00000453625 678 ntBASIC3.54□□□□□ -1.84
USP6P35125 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.54□□□□□ -1.84
USP6P35125 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
USP6P35125 RPS27P23-201ENST00000487608 251 ntBASIC3.54□□□□□ -1.84
USP6P35125 RPS29P21-201ENST00000496272 170 ntBASIC3.54□□□□□ -1.84
USP6P35125 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.54□□□□□ -1.84
USP6P35125 AC090071.1-201ENST00000507713 644 ntBASIC3.54□□□□□ -1.84
USP6P35125 AC008885.2-201ENST00000509506 930 ntBASIC3.54□□□□□ -1.84
USP6P35125 AC110792.2-201ENST00000510278 224 ntBASIC3.54□□□□□ -1.84
USP6P35125 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.54□□□□□ -1.84
USP6P35125 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.54□□□□□ -1.84
USP6P35125 RFPL1S-203ENST00000539579 330 ntBASIC3.54□□□□□ -1.84
USP6P35125 AC126365.2-201ENST00000580630 379 ntBASIC3.54□□□□□ -1.84
USP6P35125 AL512427.1-201ENST00000618593 349 ntBASIC3.54□□□□□ -1.84
USP6P35125 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
USP6P35125 AL109659.3-201ENST00000624985 950 ntBASIC3.54□□□□□ -1.84
USP6P35125 AC126544.2-201ENST00000625174 749 ntBASIC3.54□□□□□ -1.84
USP6P35125 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.54□□□□□ -1.84
USP6P35125 MIR6715B-201ENST00000637172 77 ntBASIC3.54□□□□□ -1.84
USP6P35125 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.54□□□□□ -1.84
USP6P35125 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
USP6P35125 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
USP6P35125 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
USP6P35125 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.54□□□□□ -1.84
USP6P35125 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.54□□□□□ -1.84
USP6P35125 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
USP6P35125 MTND4P8-201ENST00000514997 1362 ntBASIC3.53□□□□□ -1.84
USP6P35125 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
USP6P35125 PRRC2CP1-201ENST00000404428 159 ntBASIC3.53□□□□□ -1.84
USP6P35125 RN7SKP192-201ENST00000411291 327 ntBASIC3.53□□□□□ -1.84
USP6P35125 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.53□□□□□ -1.84
USP6P35125 PAICSP7-201ENST00000419829 962 ntBASIC3.53□□□□□ -1.84
USP6P35125 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.53□□□□□ -1.84
USP6P35125 AL009174.1-201ENST00000426577 416 ntBASIC3.53□□□□□ -1.84
USP6P35125 AC012497.1-201ENST00000429392 575 ntBASIC3.53□□□□□ -1.84
USP6P35125 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.53□□□□□ -1.84
USP6P35125 AC002542.1-201ENST00000440683 193 ntBASIC3.53□□□□□ -1.84
USP6P35125 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.53□□□□□ -1.84
USP6P35125 HMGB1P38-201ENST00000490557 577 ntBASIC3.53□□□□□ -1.84
USP6P35125 NIPA2P2-201ENST00000496376 1083 ntBASIC3.53□□□□□ -1.84
USP6P35125 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.53□□□□□ -1.84
USP6P35125 RN7SKP96-201ENST00000516948 297 ntBASIC3.53□□□□□ -1.84
USP6P35125 IGJP1-201ENST00000522682 475 ntBASIC3.53□□□□□ -1.84
USP6P35125 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.53□□□□□ -1.84
USP6P35125 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.53□□□□□ -1.84
USP6P35125 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.53□□□□□ -1.84
USP6P35125 AC004217.3-201ENST00000551552 878 ntBASIC3.53□□□□□ -1.84
USP6P35125 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.53□□□□□ -1.84
USP6P35125 AL161713.1-201ENST00000555538 145 ntBASIC3.53□□□□□ -1.84
USP6P35125 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.53□□□□□ -1.84
USP6P35125 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.53□□□□□ -1.84
USP6P35125 AC091488.1-201ENST00000604239 660 ntBASIC3.53□□□□□ -1.84
USP6P35125 AC113194.1-201ENST00000606037 500 ntBASIC3.53□□□□□ -1.84
USP6P35125 AC004825.2-201ENST00000616634 455 ntBASIC3.53□□□□□ -1.84
USP6P35125 AC007275.1-201ENST00000621243 671 ntBASIC3.53□□□□□ -1.84
USP6P35125 AP003476.1-201ENST00000623984 516 ntBASIC3.53□□□□□ -1.84
USP6P35125 AL356118.1-201ENST00000635272 1078 ntBASIC3.53□□□□□ -1.84
USP6P35125 AL592437.2-201ENST00000421655 2434 ntBASIC3.53□□□□□ -1.84
USP6P35125 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.53□□□□□ -1.84
USP6P35125 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
USP6P35125 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
USP6P35125 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.53□□□□□ -1.85
USP6P35125 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.53□□□□□ -1.85
USP6P35125 MCTS2P-201ENST00000394552 546 ntBASIC3.53□□□□□ -1.85
USP6P35125 RNA5SP247-201ENST00000411181 105 ntBASIC3.53□□□□□ -1.85
USP6P35125 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.53□□□□□ -1.85
USP6P35125 TAF13P2-201ENST00000416876 286 ntBASIC3.53□□□□□ -1.85
USP6P35125 BX276092.3-201ENST00000424182 230 ntBASIC3.53□□□□□ -1.85
USP6P35125 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.53□□□□□ -1.85
USP6P35125 RAB11AP1-201ENST00000442978 646 ntBASIC3.53□□□□□ -1.85
USP6P35125 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.53□□□□□ -1.85
USP6P35125 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.53□□□□□ -1.85
USP6P35125 AC092045.1-201ENST00000495716 1231 ntBASIC3.53□□□□□ -1.85
USP6P35125 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.53□□□□□ -1.85
USP6P35125 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
USP6P35125 NIFKP8-201ENST00000560500 874 ntBASIC3.53□□□□□ -1.85
USP6P35125 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.53□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms