Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.8□□□□□ -2.12
CKS2P33552 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
CKS2P33552 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
CKS2P33552 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
CKS2P33552 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
CKS2P33552 RNU6-989P-201ENST00000362756 107 ntBASIC1.79□□□□□ -2.12
CKS2P33552 RNA5SP456-201ENST00000364002 114 ntBASIC1.79□□□□□ -2.12
CKS2P33552 RNU1-112P-201ENST00000364401 164 ntBASIC1.79□□□□□ -2.12
CKS2P33552 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.79□□□□□ -2.12
CKS2P33552 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC1.79□□□□□ -2.12
CKS2P33552 RNU6-339P-201ENST00000384310 107 ntBASIC1.79□□□□□ -2.12
CKS2P33552 DSTNP4-201ENST00000399472 474 ntBASIC1.79□□□□□ -2.12
CKS2P33552 U3.37-201ENST00000408528 213 ntBASIC1.79□□□□□ -2.12
CKS2P33552 MIR1303-201ENST00000408625 86 ntBASIC1.79□□□□□ -2.12
CKS2P33552 RPL7P30-201ENST00000420888 709 ntBASIC1.79□□□□□ -2.12
CKS2P33552 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CKS2P33552 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC1.79□□□□□ -2.12
CKS2P33552 AC114973.1-201ENST00000429057 632 ntBASIC1.79□□□□□ -2.12
CKS2P33552 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.79□□□□□ -2.12
CKS2P33552 RPL7P29-201ENST00000437151 728 ntBASIC1.79□□□□□ -2.12
CKS2P33552 AL671855.1-201ENST00000446875 1203 ntBASIC1.79□□□□□ -2.12
CKS2P33552 SNRPGP6-201ENST00000451124 220 ntBASIC1.79□□□□□ -2.12
CKS2P33552 RN7SL542P-201ENST00000467147 294 ntBASIC1.79□□□□□ -2.12
CKS2P33552 RN7SL807P-201ENST00000470923 297 ntBASIC1.79□□□□□ -2.12
CKS2P33552 AC103987.1-201ENST00000473394 348 ntBASIC1.79□□□□□ -2.12
CKS2P33552 RPS4XP6-201ENST00000477670 797 ntBASIC1.79□□□□□ -2.12
CKS2P33552 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CKS2P33552 RNF138P1-201ENST00000502765 546 ntBASIC1.79□□□□□ -2.12
CKS2P33552 AC026427.2-201ENST00000506228 536 ntBASIC1.79□□□□□ -2.12
CKS2P33552 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.79□□□□□ -2.12
CKS2P33552 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.79□□□□□ -2.12
CKS2P33552 AC025768.1-201ENST00000510057 267 ntBASIC1.79□□□□□ -2.12
CKS2P33552 MTCO3P44-201ENST00000510977 541 ntBASIC1.79□□□□□ -2.12
CKS2P33552 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.79□□□□□ -2.12
CKS2P33552 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.79□□□□□ -2.12
CKS2P33552 AC010306.1-201ENST00000523223 1117 ntBASIC1.79□□□□□ -2.12
CKS2P33552 AP003102.1-201ENST00000525638 661 ntBASIC1.79□□□□□ -2.12
CKS2P33552 AP000867.2-201ENST00000532468 320 ntBASIC1.79□□□□□ -2.12
CKS2P33552 SNRPGP16-201ENST00000533275 226 ntBASIC1.79□□□□□ -2.12
CKS2P33552 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CKS2P33552 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CKS2P33552 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CKS2P33552 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC1.79□□□□□ -2.12
CKS2P33552 AC005412.1-201ENST00000580812 1049 ntBASIC1.79□□□□□ -2.12
CKS2P33552 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC1.79□□□□□ -2.12
CKS2P33552 AC106900.2-201ENST00000604994 317 ntBASIC1.79□□□□□ -2.12
CKS2P33552 AC006329.2-201ENST00000611491 394 ntBASIC1.79□□□□□ -2.12
CKS2P33552 MIR7975-201ENST00000619350 68 ntBASIC1.79□□□□□ -2.12
CKS2P33552 AC015967.1-201ENST00000619893 476 ntBASIC1.79□□□□□ -2.12
CKS2P33552 U4.3-201ENST00000621047 82 ntBASIC1.79□□□□□ -2.12
CKS2P33552 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CKS2P33552 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CKS2P33552 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC1.78□□□□□ -2.12
CKS2P33552 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC1.78□□□□□ -2.12
CKS2P33552 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC1.78□□□□□ -2.12
CKS2P33552 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CKS2P33552 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
CKS2P33552 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CKS2P33552 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
CKS2P33552 MIR21-201ENST00000362134 72 ntBASIC1.78□□□□□ -2.12
CKS2P33552 RNU6-386P-201ENST00000362650 107 ntBASIC1.78□□□□□ -2.12
CKS2P33552 RNU6-1249P-201ENST00000363237 111 ntBASIC1.78□□□□□ -2.12
CKS2P33552 SNORA62.3-201ENST00000365110 153 ntBASIC1.78□□□□□ -2.12
CKS2P33552 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
CKS2P33552 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
CKS2P33552 RNU6-1072P-201ENST00000384703 107 ntBASIC1.78□□□□□ -2.12
CKS2P33552 RNU6-443P-201ENST00000384780 107 ntBASIC1.78□□□□□ -2.12
CKS2P33552 MIR183-201ENST00000384958 110 ntBASIC1.78□□□□□ -2.12
CKS2P33552 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CKS2P33552 MIR1193-201ENST00000408109 78 ntBASIC1.78□□□□□ -2.12
CKS2P33552 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.78□□□□□ -2.12
CKS2P33552 ERMN-204ENST00000409925 556 ntTSL 4 BASIC1.78□□□□□ -2.12
CKS2P33552 AC007064.1-201ENST00000412238 351 ntBASIC1.78□□□□□ -2.12
CKS2P33552 AL592148.1-201ENST00000413568 445 ntBASIC1.78□□□□□ -2.12
CKS2P33552 USP9YP27-201ENST00000418455 438 ntBASIC1.78□□□□□ -2.12
CKS2P33552 FNDC3CP-201ENST00000420795 1155 ntBASIC1.78□□□□□ -2.12
CKS2P33552 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC1.78□□□□□ -2.12
CKS2P33552 AC079780.1-201ENST00000428259 207 ntBASIC1.78□□□□□ -2.12
CKS2P33552 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.78□□□□□ -2.12
CKS2P33552 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC1.78□□□□□ -2.12
CKS2P33552 AC010099.1-201ENST00000455434 375 ntBASIC1.78□□□□□ -2.12
CKS2P33552 AC107222.1-201ENST00000510899 637 ntBASIC1.78□□□□□ -2.12
CKS2P33552 TTC39CP1-201ENST00000512513 755 ntBASIC1.78□□□□□ -2.12
CKS2P33552 RNA5SP82-201ENST00000516707 92 ntBASIC1.78□□□□□ -2.12
CKS2P33552 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.78□□□□□ -2.12
CKS2P33552 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.78□□□□□ -2.12
CKS2P33552 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
CKS2P33552 SERPINE4P-201ENST00000554978 281 ntBASIC1.78□□□□□ -2.12
CKS2P33552 AC103810.1-201ENST00000579873 453 ntBASIC1.78□□□□□ -2.12
CKS2P33552 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.78□□□□□ -2.12
CKS2P33552 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC1.78□□□□□ -2.12
CKS2P33552 ABBA01000935.2-201ENST00000637477 838 ntBASIC1.78□□□□□ -2.12
CKS2P33552 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
CKS2P33552 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
CKS2P33552 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC1.77□□□□□ -2.13
CKS2P33552 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.77□□□□□ -2.13
CKS2P33552 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC1.77□□□□□ -2.13
CKS2P33552 AC016716.1-201ENST00000265882 708 ntBASIC1.77□□□□□ -2.13
CKS2P33552 RNA5SP267-201ENST00000364893 126 ntBASIC1.77□□□□□ -2.13
CKS2P33552 SNORA18.3-201ENST00000384122 132 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms