Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC007742.1-201ENST00000425789 329 ntBASIC3.66□□□□□ -1.82
PDGFRAP16234 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.66□□□□□ -1.82
PDGFRAP16234 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.66□□□□□ -1.82
PDGFRAP16234 AL158071.1-201ENST00000430315 461 ntBASIC3.66□□□□□ -1.82
PDGFRAP16234 ELOCP26-201ENST00000436067 329 ntBASIC3.66□□□□□ -1.82
PDGFRAP16234 COX7BP2-201ENST00000437976 242 ntBASIC3.66□□□□□ -1.82
PDGFRAP16234 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
PDGFRAP16234 AL357552.1-201ENST00000445254 415 ntBASIC3.66□□□□□ -1.82
PDGFRAP16234 RPL21P23-201ENST00000446654 460 ntBASIC3.66□□□□□ -1.82
PDGFRAP16234 AC005297.2-201ENST00000450430 606 ntBASIC3.66□□□□□ -1.82
PDGFRAP16234 RPS27AP1-201ENST00000475545 471 ntBASIC3.66□□□□□ -1.82
PDGFRAP16234 AC012181.1-201ENST00000479895 423 ntBASIC3.66□□□□□ -1.82
PDGFRAP16234 COX7A2P2-201ENST00000505291 250 ntBASIC3.66□□□□□ -1.82
PDGFRAP16234 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.66□□□□□ -1.82
PDGFRAP16234 AC110768.1-201ENST00000509222 400 ntBASIC3.66□□□□□ -1.82
PDGFRAP16234 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.66□□□□□ -1.82
PDGFRAP16234 RNU6-1095P-201ENST00000516148 108 ntBASIC3.66□□□□□ -1.82
PDGFRAP16234 RNU6-311P-201ENST00000516224 102 ntBASIC3.66□□□□□ -1.82
PDGFRAP16234 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.66□□□□□ -1.82
PDGFRAP16234 PDCL2P2-201ENST00000533651 189 ntBASIC3.66□□□□□ -1.82
PDGFRAP16234 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.66□□□□□ -1.82
PDGFRAP16234 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.66□□□□□ -1.82
PDGFRAP16234 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.66□□□□□ -1.82
PDGFRAP16234 SETP7-201ENST00000552169 453 ntBASIC3.66□□□□□ -1.82
PDGFRAP16234 AL163153.1-201ENST00000554223 283 ntBASIC3.66□□□□□ -1.82
PDGFRAP16234 AL512347.1-201ENST00000566420 503 ntBASIC3.66□□□□□ -1.82
PDGFRAP16234 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.66□□□□□ -1.82
PDGFRAP16234 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PDGFRAP16234 VN1R78P-201ENST00000597393 564 ntBASIC3.66□□□□□ -1.82
PDGFRAP16234 AL450336.1-201ENST00000605180 586 ntBASIC3.66□□□□□ -1.82
PDGFRAP16234 AP000240.1-201ENST00000609910 452 ntBASIC3.66□□□□□ -1.82
PDGFRAP16234 MIR7851-201ENST00000610611 160 ntBASIC3.66□□□□□ -1.82
PDGFRAP16234 AC006386.1-201ENST00000619436 415 ntBASIC3.66□□□□□ -1.82
PDGFRAP16234 AC012314.7-201ENST00000619693 93 ntBASIC3.66□□□□□ -1.82
PDGFRAP16234 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.66□□□□□ -1.82
PDGFRAP16234 AC116618.1-201ENST00000634617 774 ntBASIC3.66□□□□□ -1.82
PDGFRAP16234 AL392088.2-201ENST00000637607 285 ntBASIC3.66□□□□□ -1.82
PDGFRAP16234 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.66□□□□□ -1.82
PDGFRAP16234 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.66□□□□□ -1.82
PDGFRAP16234 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PDGFRAP16234 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.66□□□□□ -1.82
PDGFRAP16234 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
PDGFRAP16234 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
PDGFRAP16234 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.65□□□□□ -1.82
PDGFRAP16234 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
PDGFRAP16234 AL356473.1-201ENST00000406203 1408 ntBASIC3.65□□□□□ -1.83
PDGFRAP16234 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
PDGFRAP16234 MIR7-3-201ENST00000384898 110 ntBASIC3.65□□□□□ -1.83
PDGFRAP16234 CYCSP45-201ENST00000402289 315 ntBASIC3.65□□□□□ -1.83
PDGFRAP16234 OR1AA1P-201ENST00000419597 916 ntBASIC3.65□□□□□ -1.83
PDGFRAP16234 RPL7P30-201ENST00000420888 709 ntBASIC3.65□□□□□ -1.83
PDGFRAP16234 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.65□□□□□ -1.83
PDGFRAP16234 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.65□□□□□ -1.83
PDGFRAP16234 HSPE1P28-201ENST00000443139 211 ntBASIC3.65□□□□□ -1.83
PDGFRAP16234 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.65□□□□□ -1.83
PDGFRAP16234 MTCO3P11-201ENST00000455103 774 ntBASIC3.65□□□□□ -1.83
PDGFRAP16234 AC096751.1-202ENST00000502691 1067 ntBASIC3.65□□□□□ -1.83
PDGFRAP16234 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.65□□□□□ -1.83
PDGFRAP16234 AC004062.1-201ENST00000509926 645 ntBASIC3.65□□□□□ -1.83
PDGFRAP16234 AC021146.1-201ENST00000511202 716 ntBASIC3.65□□□□□ -1.83
PDGFRAP16234 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.65□□□□□ -1.83
PDGFRAP16234 DUXAP2-201ENST00000519198 589 ntBASIC3.65□□□□□ -1.83
PDGFRAP16234 AC022861.1-201ENST00000522981 663 ntBASIC3.65□□□□□ -1.83
PDGFRAP16234 AC103843.2-201ENST00000530523 682 ntBASIC3.65□□□□□ -1.83
PDGFRAP16234 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
PDGFRAP16234 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PDGFRAP16234 AC010198.2-201ENST00000550612 259 ntBASIC3.65□□□□□ -1.83
PDGFRAP16234 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.65□□□□□ -1.83
PDGFRAP16234 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.65□□□□□ -1.83
PDGFRAP16234 MTND4P33-201ENST00000556706 766 ntBASIC3.65□□□□□ -1.83
PDGFRAP16234 AC009712.1-201ENST00000564938 316 ntBASIC3.65□□□□□ -1.83
PDGFRAP16234 AC092354.2-201ENST00000607786 514 ntBASIC3.65□□□□□ -1.83
PDGFRAP16234 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.65□□□□□ -1.83
PDGFRAP16234 AC068787.1-201ENST00000623908 691 ntBASIC3.65□□□□□ -1.83
PDGFRAP16234 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.65□□□□□ -1.83
PDGFRAP16234 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.65□□□□□ -1.83
PDGFRAP16234 MTND5P24-201ENST00000438892 1767 ntBASIC3.65□□□□□ -1.83
PDGFRAP16234 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PDGFRAP16234 OR5BR1P-201ENST00000524992 1330 ntBASIC3.65□□□□□ -1.83
PDGFRAP16234 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.65□□□□□ -1.83
PDGFRAP16234 AL136164.4-201ENST00000625013 2135 ntBASIC3.64□□□□□ -1.83
PDGFRAP16234 TNPO1P3-201ENST00000436471 2662 ntBASIC3.64□□□□□ -1.83
PDGFRAP16234 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PDGFRAP16234 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PDGFRAP16234 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.64□□□□□ -1.83
PDGFRAP16234 EI24P2-201ENST00000397776 1076 ntBASIC3.64□□□□□ -1.83
PDGFRAP16234 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.64□□□□□ -1.83
PDGFRAP16234 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.64□□□□□ -1.83
PDGFRAP16234 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.64□□□□□ -1.83
PDGFRAP16234 MTATP6P27-201ENST00000416987 621 ntBASIC3.64□□□□□ -1.83
PDGFRAP16234 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.64□□□□□ -1.83
PDGFRAP16234 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.64□□□□□ -1.83
PDGFRAP16234 DUTP6-201ENST00000425573 462 ntBASIC3.64□□□□□ -1.83
PDGFRAP16234 AC092641.1-201ENST00000440229 772 ntBASIC3.64□□□□□ -1.83
PDGFRAP16234 CR769776.1-201ENST00000441254 787 ntBASIC3.64□□□□□ -1.83
PDGFRAP16234 ARPC3P5-201ENST00000448802 534 ntBASIC3.64□□□□□ -1.83
PDGFRAP16234 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PDGFRAP16234 HMGB1P15-201ENST00000453854 435 ntBASIC3.64□□□□□ -1.83
PDGFRAP16234 AC007967.1-201ENST00000455422 1159 ntBASIC3.64□□□□□ -1.83
PDGFRAP16234 USP9YP25-201ENST00000457708 443 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms