Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 MTND5P2-201ENST00000442927 1142 ntBASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 AL606662.1-201ENST00000445763 553 ntBASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 RPS17P13-201ENST00000448974 407 ntBASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 AL353691.1-201ENST00000451332 387 ntBASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 ARPC3P2-201ENST00000457786 533 ntBASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 SNORD105B-201ENST00000458770 79 ntBASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 snoU13.8-201ENST00000458890 104 ntBASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 snoU13.24-201ENST00000458998 104 ntBASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 AC017015.1-201ENST00000477387 286 ntBASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 AC068587.2-201ENST00000478386 781 ntBASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 RPL7P24-201ENST00000493052 752 ntBASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 HMGB1P22-201ENST00000505315 124 ntBASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 AC093677.1-201ENST00000514414 678 ntBASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 AC007991.1-201ENST00000522680 631 ntBASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 MTATP6P15-201ENST00000527233 835 ntBASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 OR5D17P-201ENST00000531492 978 ntBASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 AC092851.1-201ENST00000535964 478 ntBASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 AC087481.2-201ENST00000565492 330 ntBASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 AC145350.1-201ENST00000567426 208 ntBASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 VN1R90P-201ENST00000595717 726 ntBASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 AP000811.1-201ENST00000603803 651 ntBASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 DUXAP11-201ENST00000603858 526 ntBASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 U3.45-201ENST00000607547 219 ntBASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 AL590282.1-201ENST00000610379 1136 ntBASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 AC018816.2-201ENST00000621460 353 ntBASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 AL356585.4-201ENST00000623078 1229 ntBASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 AL356596.1-201ENST00000624230 379 ntBASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 AC120349.3-201ENST00000624377 529 ntBASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 USP8P1-201ENST00000494673 3183 ntBASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RAB40ALP0C0E4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 MIR208A-201ENST00000362287 71 ntBASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 RNU1-18P-201ENST00000363062 164 ntBASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 RNU6-777P-201ENST00000364265 104 ntBASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 RNA5SP88-201ENST00000365560 109 ntBASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 RNU6-723P-201ENST00000383973 107 ntBASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 SNORD3H-201ENST00000384486 214 ntBASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 AF228730.1-201ENST00000397972 663 ntBASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 MIR320C1-201ENST00000408566 88 ntBASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 RHEBP3-201ENST00000411920 351 ntBASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 RPS29P4-201ENST00000414733 161 ntBASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 AC093578.1-201ENST00000415219 368 ntBASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 AC099677.1-201ENST00000420575 175 ntBASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 RPL21P66-201ENST00000426566 466 ntBASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 HMGN2P31-201ENST00000432430 273 ntBASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 HSPD1P21-201ENST00000436541 245 ntBASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 AL117351.1-201ENST00000438864 766 ntBASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 RPS3AP46-201ENST00000448352 682 ntBASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 AC006480.1-201ENST00000449887 378 ntBASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 RPS24P6-201ENST00000452670 400 ntBASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 UBDP1-202ENST00000457888 382 ntBASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 MTCO2P6-201ENST00000463134 685 ntBASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 AC104563.1-201ENST00000476147 376 ntBASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 AC110768.1-201ENST00000509222 400 ntBASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 TXNP6-201ENST00000510190 310 ntBASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 AC026726.1-201ENST00000512859 601 ntBASIC3.54□□□□□ -1.84
RAB40ALP0C0E4 RNU6-1095P-201ENST00000516148 108 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms