Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXC6P09630 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXC6P09630 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXC6P09630 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC6P09630 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXC6P09630 AC096656.1-201ENST00000623826 1364 ntBASIC4.11□□□□□ -1.75
HOXC6P09630 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC6P09630 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXC6P09630 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXC6P09630 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXC6P09630 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.1□□□□□ -1.75
HOXC6P09630 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HOXC6P09630 RNU6-492P-201ENST00000363035 104 ntBASIC4.1□□□□□ -1.75
HOXC6P09630 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HOXC6P09630 SNORA75-201ENST00000384158 137 ntBASIC4.1□□□□□ -1.75
HOXC6P09630 Y_RNA.516-201ENST00000384541 124 ntBASIC4.1□□□□□ -1.75
HOXC6P09630 RN7SKP111-201ENST00000410349 271 ntBASIC4.1□□□□□ -1.75
HOXC6P09630 RAD23BP2-201ENST00000416003 1207 ntBASIC4.1□□□□□ -1.75
HOXC6P09630 AL513175.1-201ENST00000431492 780 ntBASIC4.1□□□□□ -1.75
HOXC6P09630 USP9YP35-201ENST00000435696 412 ntBASIC4.1□□□□□ -1.75
HOXC6P09630 AL031663.1-201ENST00000437445 219 ntBASIC4.1□□□□□ -1.75
HOXC6P09630 AC004865.1-201ENST00000442276 1003 ntBASIC4.1□□□□□ -1.75
HOXC6P09630 ST13P20-201ENST00000447996 1065 ntBASIC4.1□□□□□ -1.75
HOXC6P09630 AL034418.1-201ENST00000448675 860 ntBASIC4.1□□□□□ -1.75
HOXC6P09630 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXC6P09630 RPL21P10-201ENST00000463521 490 ntBASIC4.1□□□□□ -1.75
HOXC6P09630 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXC6P09630 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXC6P09630 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.1□□□□□ -1.75
HOXC6P09630 RN7SKP209-201ENST00000516888 304 ntBASIC4.1□□□□□ -1.75
HOXC6P09630 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXC6P09630 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXC6P09630 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXC6P09630 AC011611.1-201ENST00000552179 197 ntBASIC4.1□□□□□ -1.75
HOXC6P09630 AC245505.1-201ENST00000556398 224 ntBASIC4.1□□□□□ -1.75
HOXC6P09630 AC106782.4-201ENST00000568264 210 ntBASIC4.1□□□□□ -1.75
HOXC6P09630 AC074051.3-201ENST00000570238 358 ntBASIC4.1□□□□□ -1.75
HOXC6P09630 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXC6P09630 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXC6P09630 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXC6P09630 AC025594.3-201ENST00000613068 790 ntBASIC4.1□□□□□ -1.75
HOXC6P09630 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HOXC6P09630 AL359740.1-201ENST00000624340 592 ntBASIC4.1□□□□□ -1.75
HOXC6P09630 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXC6P09630 MKKS-204ENST00000639674 192 ntBASIC4.1□□□□□ -1.75
HOXC6P09630 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
HOXC6P09630 AC107982.1-201ENST00000507171 1300 ntBASIC4.1□□□□□ -1.75
HOXC6P09630 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
HOXC6P09630 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HOXC6P09630 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HOXC6P09630 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.09□□□□□ -1.75
HOXC6P09630 AC046144.1-201ENST00000478559 1853 ntBASIC4.09□□□□□ -1.75
HOXC6P09630 AC009229.4-201ENST00000623854 1947 ntBASIC4.09□□□□□ -1.75
HOXC6P09630 BDP1P-201ENST00000582658 1990 ntBASIC4.09□□□□□ -1.75
HOXC6P09630 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HOXC6P09630 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HOXC6P09630 AC058791.1-201ENST00000608412 3198 ntBASIC4.09□□□□□ -1.75
HOXC6P09630 AL133383.2-201ENST00000622958 2336 ntBASIC4.09□□□□□ -1.75
HOXC6P09630 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HOXC6P09630 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HOXC6P09630 RNU4-35P-201ENST00000362588 141 ntBASIC4.09□□□□□ -1.75
HOXC6P09630 Y_RNA.302-201ENST00000364997 102 ntBASIC4.09□□□□□ -1.75
HOXC6P09630 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
HOXC6P09630 RNY3P10-201ENST00000384764 102 ntBASIC4.09□□□□□ -1.75
HOXC6P09630 AL139098.1-201ENST00000407291 389 ntBASIC4.09□□□□□ -1.75
HOXC6P09630 MIR1284-201ENST00000408337 120 ntBASIC4.09□□□□□ -1.75
HOXC6P09630 RNU6-272P-201ENST00000411028 104 ntBASIC4.09□□□□□ -1.75
HOXC6P09630 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HOXC6P09630 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.09□□□□□ -1.75
HOXC6P09630 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXC6P09630 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.09□□□□□ -1.75
HOXC6P09630 AC073069.1-201ENST00000428657 441 ntBASIC4.09□□□□□ -1.75
HOXC6P09630 C8orf59P1-201ENST00000429930 303 ntBASIC4.09□□□□□ -1.75
HOXC6P09630 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXC6P09630 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.09□□□□□ -1.75
HOXC6P09630 RPL12P46-201ENST00000436610 195 ntBASIC4.09□□□□□ -1.75
HOXC6P09630 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.09□□□□□ -1.75
HOXC6P09630 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.09□□□□□ -1.75
HOXC6P09630 NPM1P49-201ENST00000448027 714 ntBASIC4.09□□□□□ -1.75
HOXC6P09630 RPL26P28-201ENST00000451325 435 ntBASIC4.09□□□□□ -1.75
HOXC6P09630 MTCYBP1-201ENST00000454315 1119 ntBASIC4.09□□□□□ -1.75
HOXC6P09630 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.09□□□□□ -1.75
HOXC6P09630 TPT1P7-201ENST00000458300 517 ntBASIC4.09□□□□□ -1.75
HOXC6P09630 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXC6P09630 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXC6P09630 MTCYBP43-201ENST00000513621 740 ntBASIC4.09□□□□□ -1.75
HOXC6P09630 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.09□□□□□ -1.75
HOXC6P09630 AC008011.1-201ENST00000545989 227 ntBASIC4.09□□□□□ -1.75
HOXC6P09630 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.09□□□□□ -1.75
HOXC6P09630 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXC6P09630 AC015871.2-201ENST00000603605 948 ntBASIC4.09□□□□□ -1.75
HOXC6P09630 AL136363.2-201ENST00000604173 851 ntBASIC4.09□□□□□ -1.75
HOXC6P09630 AC116447.1-201ENST00000613153 453 ntBASIC4.09□□□□□ -1.75
HOXC6P09630 MIR7844-201ENST00000616161 122 ntBASIC4.09□□□□□ -1.75
HOXC6P09630 AP003355.3-201ENST00000623465 114 ntBASIC4.09□□□□□ -1.75
HOXC6P09630 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.09□□□□□ -1.75
HOXC6P09630 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.09□□□□□ -1.75
HOXC6P09630 AC068137.3-201ENST00000639191 341 ntBASIC4.09□□□□□ -1.75
HOXC6P09630 AC073869.6-201ENST00000640656 341 ntBASIC4.09□□□□□ -1.75
HOXC6P09630 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms