Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 SCARNA16.3-201ENST00000516595 184 ntBASIC3.15□□□□□ -1.91
POLR1AO95602 RN7SKP82-201ENST00000516786 223 ntBASIC3.15□□□□□ -1.91
POLR1AO95602 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.15□□□□□ -1.91
POLR1AO95602 AC245517.5-201ENST00000611529 162 ntBASIC3.15□□□□□ -1.91
POLR1AO95602 SNORA50A-202ENST00000629536 136 ntBASIC3.15□□□□□ -1.91
POLR1AO95602 AC138649.5-201ENST00000637456 137 ntBASIC3.15□□□□□ -1.91
POLR1AO95602 MIR365B-201ENST00000362317 111 ntBASIC3.14□□□□□ -1.91
POLR1AO95602 RNA5SP181-201ENST00000410246 98 ntBASIC3.14□□□□□ -1.91
POLR1AO95602 AC004866.2-201ENST00000438285 481 ntBASIC3.14□□□□□ -1.91
POLR1AO95602 NDUFA5P6-201ENST00000542110 379 ntBASIC3.14□□□□□ -1.91
POLR1AO95602 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.14□□□□□ -1.91
POLR1AO95602 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
POLR1AO95602 AC093775.1-201ENST00000624154 1868 ntBASIC3.14□□□□□ -1.91
POLR1AO95602 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
POLR1AO95602 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
POLR1AO95602 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.13□□□□□ -1.91
POLR1AO95602 AC013470.3-201ENST00000420252 1194 ntBASIC3.13□□□□□ -1.91
POLR1AO95602 RPL34P26-201ENST00000445636 354 ntBASIC3.13□□□□□ -1.91
POLR1AO95602 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.13□□□□□ -1.91
POLR1AO95602 AC010265.1-201ENST00000513509 211 ntBASIC3.13□□□□□ -1.91
POLR1AO95602 RNA5SP200-201ENST00000516360 103 ntBASIC3.13□□□□□ -1.91
POLR1AO95602 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.13□□□□□ -1.91
POLR1AO95602 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.13□□□□□ -1.91
POLR1AO95602 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.13□□□□□ -1.91
POLR1AO95602 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
POLR1AO95602 MIR221-201ENST00000385135 110 ntBASIC3.13□□□□□ -1.91
POLR1AO95602 U3.37-201ENST00000408528 213 ntBASIC3.13□□□□□ -1.91
POLR1AO95602 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.13□□□□□ -1.91
POLR1AO95602 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.13□□□□□ -1.91
POLR1AO95602 AC087241.2-201ENST00000535801 324 ntBASIC3.13□□□□□ -1.91
POLR1AO95602 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.13□□□□□ -1.91
POLR1AO95602 AC012182.1-201ENST00000570133 895 ntBASIC3.13□□□□□ -1.91
POLR1AO95602 AC108479.2-201ENST00000617314 601 ntBASIC3.13□□□□□ -1.91
POLR1AO95602 MFSD8-245ENST00000641743 948 ntBASIC3.13□□□□□ -1.91
POLR1AO95602 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
POLR1AO95602 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
POLR1AO95602 AL355578.1-201ENST00000607405 1328 ntBASIC3.12□□□□□ -1.91
POLR1AO95602 AC004520.1-201ENST00000608362 1413 ntBASIC3.12□□□□□ -1.91
POLR1AO95602 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.12□□□□□ -1.91
POLR1AO95602 Y_RNA.116-201ENST00000363292 103 ntBASIC3.12□□□□□ -1.91
POLR1AO95602 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.12□□□□□ -1.91
POLR1AO95602 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.12□□□□□ -1.91
POLR1AO95602 CYCSP49-201ENST00000420810 319 ntBASIC3.12□□□□□ -1.91
POLR1AO95602 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.12□□□□□ -1.91
POLR1AO95602 AC092427.1-202ENST00000430569 476 ntBASIC3.12□□□□□ -1.91
POLR1AO95602 AC098826.1-201ENST00000433943 471 ntBASIC3.12□□□□□ -1.91
POLR1AO95602 RPS15AP28-201ENST00000435088 386 ntBASIC3.12□□□□□ -1.91
POLR1AO95602 AC011753.1-201ENST00000451001 220 ntBASIC3.12□□□□□ -1.91
POLR1AO95602 SNRPGP9-201ENST00000456025 225 ntBASIC3.12□□□□□ -1.91
POLR1AO95602 VTA1P2-201ENST00000520205 911 ntBASIC3.12□□□□□ -1.91
POLR1AO95602 AC008083.2-201ENST00000546707 476 ntBASIC3.12□□□□□ -1.91
POLR1AO95602 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.12□□□□□ -1.91
POLR1AO95602 DUXAP3-201ENST00000603616 594 ntBASIC3.12□□□□□ -1.91
POLR1AO95602 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
POLR1AO95602 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
POLR1AO95602 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.11□□□□□ -1.91
POLR1AO95602 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
POLR1AO95602 MIR378A-201ENST00000362177 66 ntBASIC3.11□□□□□ -1.91
POLR1AO95602 ELOCP13-201ENST00000443934 329 ntBASIC3.11□□□□□ -1.91
POLR1AO95602 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.11□□□□□ -1.91
POLR1AO95602 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.11□□□□□ -1.91
POLR1AO95602 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.11□□□□□ -1.91
POLR1AO95602 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.11□□□□□ -1.91
POLR1AO95602 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
POLR1AO95602 RPL23AP78-201ENST00000599928 470 ntBASIC3.11□□□□□ -1.91
POLR1AO95602 AC034102.8-201ENST00000615146 484 ntBASIC3.11□□□□□ -1.91
POLR1AO95602 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
POLR1AO95602 HMGN2P35-201ENST00000412164 270 ntBASIC3.1□□□□□ -1.91
POLR1AO95602 NDUFB4P6-201ENST00000436819 366 ntBASIC3.1□□□□□ -1.91
POLR1AO95602 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.1□□□□□ -1.91
POLR1AO95602 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.1□□□□□ -1.91
POLR1AO95602 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
POLR1AO95602 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.1□□□□□ -1.91
POLR1AO95602 Y_RNA.540-201ENST00000384638 111 ntBASIC3.1□□□□□ -1.91
POLR1AO95602 RNA5SP270-201ENST00000411361 118 ntBASIC3.1□□□□□ -1.91
POLR1AO95602 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.1□□□□□ -1.91
POLR1AO95602 NDUFA5P4-201ENST00000436704 385 ntBASIC3.1□□□□□ -1.91
POLR1AO95602 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.1□□□□□ -1.91
POLR1AO95602 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.1□□□□□ -1.91
POLR1AO95602 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.1□□□□□ -1.91
POLR1AO95602 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.1□□□□□ -1.91
POLR1AO95602 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
POLR1AO95602 AC007687.1-201ENST00000602704 304 ntBASIC3.1□□□□□ -1.91
POLR1AO95602 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
POLR1AO95602 AC093591.3-201ENST00000634516 308 ntBASIC3.1□□□□□ -1.91
POLR1AO95602 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
POLR1AO95602 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
POLR1AO95602 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
POLR1AO95602 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.09□□□□□ -1.91
POLR1AO95602 MTND4P13-201ENST00000402078 1023 ntBASIC3.09□□□□□ -1.91
POLR1AO95602 EI24P1-201ENST00000416584 867 ntBASIC3.09□□□□□ -1.91
POLR1AO95602 RPS26P30-201ENST00000443431 335 ntBASIC3.09□□□□□ -1.91
POLR1AO95602 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.09□□□□□ -1.91
POLR1AO95602 RPL38P4-201ENST00000502376 214 ntBASIC3.09□□□□□ -1.91
POLR1AO95602 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.09□□□□□ -1.91
POLR1AO95602 MIR5002-201ENST00000584713 97 ntBASIC3.09□□□□□ -1.91
POLR1AO95602 AC011890.2-201ENST00000613393 294 ntBASIC3.09□□□□□ -1.91
POLR1AO95602 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.09□□□□□ -1.91
POLR1AO95602 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.09□□□□□ -1.92
POLR1AO95602 AF127577.6-201ENST00000623352 2191 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms