Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 AL139156.1-201ENST00000412785 841 ntBASIC3.55□□□□□ -1.84
PCF11O94913 RPL7P54-201ENST00000438336 674 ntBASIC3.55□□□□□ -1.84
PCF11O94913 AC010683.1-201ENST00000473673 378 ntBASIC3.55□□□□□ -1.84
PCF11O94913 AC104090.1-201ENST00000506341 1171 ntBASIC3.55□□□□□ -1.84
PCF11O94913 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.55□□□□□ -1.84
PCF11O94913 HMGB1P41-201ENST00000520234 440 ntBASIC3.55□□□□□ -1.84
PCF11O94913 AC011494.1-201ENST00000596454 237 ntBASIC3.55□□□□□ -1.84
PCF11O94913 AP004372.1-201ENST00000604842 844 ntBASIC3.55□□□□□ -1.84
PCF11O94913 AC004943.3-201ENST00000624116 600 ntBASIC3.55□□□□□ -1.84
PCF11O94913 LRRC77P-213ENST00000637727 880 ntBASIC3.55□□□□□ -1.84
PCF11O94913 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.55□□□□□ -1.84
PCF11O94913 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PCF11O94913 RNU6-233P-201ENST00000410845 141 ntBASIC3.55□□□□□ -1.84
PCF11O94913 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC3.55□□□□□ -1.84
PCF11O94913 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.55□□□□□ -1.84
PCF11O94913 RPL23AP44-201ENST00000482216 473 ntBASIC3.55□□□□□ -1.84
PCF11O94913 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
PCF11O94913 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.55□□□□□ -1.84
PCF11O94913 RN7SL622P-201ENST00000585292 275 ntBASIC3.55□□□□□ -1.84
PCF11O94913 VN1R84P-201ENST00000593697 235 ntBASIC3.55□□□□□ -1.84
PCF11O94913 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.55□□□□□ -1.84
PCF11O94913 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.55□□□□□ -1.84
PCF11O94913 ABI1P1-201ENST00000603375 1120 ntBASIC3.55□□□□□ -1.84
PCF11O94913 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCF11O94913 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PCF11O94913 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCF11O94913 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCF11O94913 MIR21-201ENST00000362134 72 ntBASIC3.54□□□□□ -1.84
PCF11O94913 FGF7P8-201ENST00000402994 292 ntBASIC3.54□□□□□ -1.84
PCF11O94913 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.54□□□□□ -1.84
PCF11O94913 AC108078.2-201ENST00000510750 236 ntBASIC3.54□□□□□ -1.84
PCF11O94913 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.54□□□□□ -1.84
PCF11O94913 RNU6ATAC9P-201ENST00000516210 116 ntBASIC3.54□□□□□ -1.84
PCF11O94913 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.54□□□□□ -1.84
PCF11O94913 MTCO3P13-201ENST00000577757 781 ntBASIC3.54□□□□□ -1.84
PCF11O94913 MIR4458-201ENST00000578872 75 ntBASIC3.54□□□□□ -1.84
PCF11O94913 VN1R80P-201ENST00000597126 338 ntBASIC3.54□□□□□ -1.84
PCF11O94913 AL359821.1-201ENST00000605519 182 ntBASIC3.54□□□□□ -1.84
PCF11O94913 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.54□□□□□ -1.84
PCF11O94913 C2orf27A-204ENST00000623058 969 ntBASIC3.54□□□□□ -1.84
PCF11O94913 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.54□□□□□ -1.84
PCF11O94913 AC008432.1-201ENST00000615912 1320 ntBASIC3.54□□□□□ -1.84
PCF11O94913 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PCF11O94913 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.53□□□□□ -1.84
PCF11O94913 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.53□□□□□ -1.84
PCF11O94913 AL034374.1-201ENST00000406329 351 ntBASIC3.53□□□□□ -1.84
PCF11O94913 AC012170.1-201ENST00000495139 359 ntBASIC3.53□□□□□ -1.84
PCF11O94913 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.53□□□□□ -1.84
PCF11O94913 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.53□□□□□ -1.84
PCF11O94913 AC093331.1-201ENST00000521474 169 ntBASIC3.53□□□□□ -1.84
PCF11O94913 AL670379.6-201ENST00000603753 252 ntBASIC3.53□□□□□ -1.84
PCF11O94913 AL670379.11-201ENST00000604059 253 ntBASIC3.53□□□□□ -1.84
PCF11O94913 AL670379.10-201ENST00000604330 253 ntBASIC3.53□□□□□ -1.84
PCF11O94913 AC008162.1-201ENST00000604718 254 ntBASIC3.53□□□□□ -1.84
PCF11O94913 AL670379.1-201ENST00000604752 252 ntBASIC3.53□□□□□ -1.84
PCF11O94913 AL670379.2-201ENST00000604983 252 ntBASIC3.53□□□□□ -1.84
PCF11O94913 AL670379.5-201ENST00000605253 252 ntBASIC3.53□□□□□ -1.84
PCF11O94913 AL670379.4-201ENST00000605279 254 ntBASIC3.53□□□□□ -1.84
PCF11O94913 AL670379.12-201ENST00000605291 253 ntBASIC3.53□□□□□ -1.84
PCF11O94913 AL670379.8-201ENST00000605353 252 ntBASIC3.53□□□□□ -1.84
PCF11O94913 AL670379.9-201ENST00000605428 253 ntBASIC3.53□□□□□ -1.84
PCF11O94913 AL670379.7-201ENST00000605823 252 ntBASIC3.53□□□□□ -1.84
PCF11O94913 AL592494.3-201ENST00000609485 464 ntBASIC3.53□□□□□ -1.84
PCF11O94913 YWHAEP7-203ENST00000622054 312 ntBASIC3.53□□□□□ -1.84
PCF11O94913 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PCF11O94913 OR1S1-201ENST00000624470 978 ntBASIC3.53□□□□□ -1.84
PCF11O94913 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PCF11O94913 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
PCF11O94913 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCF11O94913 RNU6-697P-201ENST00000363348 107 ntBASIC3.52□□□□□ -1.85
PCF11O94913 DEFA7P-201ENST00000382676 285 ntBASIC3.52□□□□□ -1.85
PCF11O94913 AC009965.2-201ENST00000425328 970 ntBASIC3.52□□□□□ -1.85
PCF11O94913 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.52□□□□□ -1.85
PCF11O94913 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.52□□□□□ -1.85
PCF11O94913 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.52□□□□□ -1.85
PCF11O94913 CEACAMP4-201ENST00000457676 421 ntBASIC3.52□□□□□ -1.85
PCF11O94913 AC087385.1-201ENST00000475062 312 ntBASIC3.52□□□□□ -1.85
PCF11O94913 AC010627.1-201ENST00000503819 1294 ntBASIC3.52□□□□□ -1.85
PCF11O94913 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.52□□□□□ -1.85
PCF11O94913 AC135628.1-201ENST00000568867 534 ntBASIC3.52□□□□□ -1.85
PCF11O94913 AC012182.1-201ENST00000570133 895 ntBASIC3.52□□□□□ -1.85
PCF11O94913 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC3.52□□□□□ -1.85
PCF11O94913 AC023043.3-201ENST00000593113 385 ntBASIC3.52□□□□□ -1.85
PCF11O94913 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.52□□□□□ -1.85
PCF11O94913 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.52□□□□□ -1.85
PCF11O94913 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
PCF11O94913 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.52□□□□□ -1.85
PCF11O94913 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCF11O94913 CYCSP49-201ENST00000420810 319 ntBASIC3.51□□□□□ -1.85
PCF11O94913 RPL7P53-201ENST00000421245 739 ntBASIC3.51□□□□□ -1.85
PCF11O94913 AC092427.1-202ENST00000430569 476 ntBASIC3.51□□□□□ -1.85
PCF11O94913 AC098826.1-201ENST00000433943 471 ntBASIC3.51□□□□□ -1.85
PCF11O94913 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.51□□□□□ -1.85
PCF11O94913 AL353093.1-201ENST00000441292 436 ntBASIC3.51□□□□□ -1.85
PCF11O94913 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.51□□□□□ -1.85
PCF11O94913 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.51□□□□□ -1.85
PCF11O94913 AL161713.1-201ENST00000555538 145 ntBASIC3.51□□□□□ -1.85
PCF11O94913 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.51□□□□□ -1.85
PCF11O94913 AL160237.3-201ENST00000604114 1013 ntBASIC3.51□□□□□ -1.85
PCF11O94913 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms