Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LDB3O75112 AC091516.1-201ENST00000549191 703 ntBASIC3.75□□□□□ -1.81
LDB3O75112 GNRHR2P1-201ENST00000555315 631 ntBASIC3.75□□□□□ -1.81
LDB3O75112 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.75□□□□□ -1.81
LDB3O75112 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.75□□□□□ -1.81
LDB3O75112 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.75□□□□□ -1.81
LDB3O75112 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.75□□□□□ -1.81
LDB3O75112 SEPT7P9-203ENST00000604116 343 ntBASIC3.75□□□□□ -1.81
LDB3O75112 RNA5SP108-201ENST00000605921 117 ntBASIC3.75□□□□□ -1.81
LDB3O75112 AL159169.3-201ENST00000608871 561 ntBASIC3.75□□□□□ -1.81
LDB3O75112 AL591424.2-201ENST00000617023 128 ntBASIC3.75□□□□□ -1.81
LDB3O75112 AC019226.1-201ENST00000625666 515 ntBASIC3.75□□□□□ -1.81
LDB3O75112 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.75□□□□□ -1.81
LDB3O75112 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LDB3O75112 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LDB3O75112 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
LDB3O75112 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.75□□□□□ -1.81
LDB3O75112 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LDB3O75112 DCAF13P1-201ENST00000495256 1330 ntBASIC3.74□□□□□ -1.81
LDB3O75112 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
LDB3O75112 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LDB3O75112 FAM91A3P-201ENST00000456826 2544 ntBASIC3.74□□□□□ -1.81
LDB3O75112 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.74□□□□□ -1.81
LDB3O75112 RNU6-501P-201ENST00000364072 100 ntBASIC3.74□□□□□ -1.81
LDB3O75112 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.74□□□□□ -1.81
LDB3O75112 ARF4P3-201ENST00000397387 509 ntBASIC3.74□□□□□ -1.81
LDB3O75112 EIF5P1-201ENST00000400019 1231 ntBASIC3.74□□□□□ -1.81
LDB3O75112 SNORA3C-201ENST00000408792 125 ntBASIC3.74□□□□□ -1.81
LDB3O75112 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.74□□□□□ -1.81
LDB3O75112 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.74□□□□□ -1.81
LDB3O75112 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.74□□□□□ -1.81
LDB3O75112 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.74□□□□□ -1.81
LDB3O75112 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.74□□□□□ -1.81
LDB3O75112 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.74□□□□□ -1.81
LDB3O75112 RPL23AP33-201ENST00000442301 452 ntBASIC3.74□□□□□ -1.81
LDB3O75112 HSFY6P-201ENST00000445573 403 ntBASIC3.74□□□□□ -1.81
LDB3O75112 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.74□□□□□ -1.81
LDB3O75112 AC026410.2-201ENST00000460281 156 ntBASIC3.74□□□□□ -1.81
LDB3O75112 KLF3P2-201ENST00000465138 268 ntBASIC3.74□□□□□ -1.81
LDB3O75112 AC004924.1-201ENST00000480160 781 ntBASIC3.74□□□□□ -1.81
LDB3O75112 RN7SL271P-201ENST00000487601 295 ntBASIC3.74□□□□□ -1.81
LDB3O75112 AC093267.1-201ENST00000489176 961 ntBASIC3.74□□□□□ -1.81
LDB3O75112 AC108941.1-201ENST00000502853 530 ntBASIC3.74□□□□□ -1.81
LDB3O75112 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.74□□□□□ -1.81
LDB3O75112 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.74□□□□□ -1.81
LDB3O75112 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LDB3O75112 TMEM248P1-201ENST00000510579 951 ntBASIC3.74□□□□□ -1.81
LDB3O75112 PTGES3P3-201ENST00000511479 482 ntBASIC3.74□□□□□ -1.81
LDB3O75112 AC108064.1-201ENST00000513791 460 ntBASIC3.74□□□□□ -1.81
LDB3O75112 MTCO1P24-201ENST00000515438 1558 ntBASIC3.74□□□□□ -1.81
LDB3O75112 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.74□□□□□ -1.81
LDB3O75112 RNU6-150P-201ENST00000516237 95 ntBASIC3.74□□□□□ -1.81
LDB3O75112 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.74□□□□□ -1.81
LDB3O75112 AC104986.1-201ENST00000517978 436 ntBASIC3.74□□□□□ -1.81
LDB3O75112 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.74□□□□□ -1.81
LDB3O75112 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.74□□□□□ -1.81
LDB3O75112 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.74□□□□□ -1.81
LDB3O75112 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.74□□□□□ -1.81
LDB3O75112 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.74□□□□□ -1.81
LDB3O75112 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.74□□□□□ -1.81
LDB3O75112 PCMTD1P2-201ENST00000565017 355 ntBASIC3.74□□□□□ -1.81
LDB3O75112 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.74□□□□□ -1.81
LDB3O75112 AC120057.2-201ENST00000571520 271 ntBASIC3.74□□□□□ -1.81
LDB3O75112 MIR5186-201ENST00000577504 120 ntBASIC3.74□□□□□ -1.81
LDB3O75112 MIR3913-1-201ENST00000577744 102 ntBASIC3.74□□□□□ -1.81
LDB3O75112 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.74□□□□□ -1.81
LDB3O75112 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.74□□□□□ -1.81
LDB3O75112 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.74□□□□□ -1.81
LDB3O75112 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.74□□□□□ -1.81
LDB3O75112 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.74□□□□□ -1.81
LDB3O75112 AC091167.4-201ENST00000605079 184 ntBASIC3.74□□□□□ -1.81
LDB3O75112 AC007014.2-201ENST00000615581 479 ntBASIC3.74□□□□□ -1.81
LDB3O75112 AC027807.2-201ENST00000616099 408 ntBASIC3.74□□□□□ -1.81
LDB3O75112 LINC00901.1-201ENST00000617252 152 ntBASIC3.74□□□□□ -1.81
LDB3O75112 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.74□□□□□ -1.81
LDB3O75112 MIR6500-201ENST00000622700 86 ntBASIC3.74□□□□□ -1.81
LDB3O75112 AC006065.5-201ENST00000623427 349 ntBASIC3.74□□□□□ -1.81
LDB3O75112 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.74□□□□□ -1.81
LDB3O75112 OR5AK4P-201ENST00000635912 903 ntBASIC3.74□□□□□ -1.81
LDB3O75112 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
LDB3O75112 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LDB3O75112 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LDB3O75112 AC130650.2-201ENST00000618736 2403 ntBASIC3.74□□□□□ -1.81
LDB3O75112 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LDB3O75112 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
LDB3O75112 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.74□□□□□ -1.81
LDB3O75112 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.73□□□□□ -1.81
LDB3O75112 GDI2P1-201ENST00000429312 1336 ntBASIC3.73□□□□□ -1.81
LDB3O75112 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LDB3O75112 AP002907.1-201ENST00000606361 1430 ntBASIC3.73□□□□□ -1.81
LDB3O75112 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LDB3O75112 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.73□□□□□ -1.81
LDB3O75112 RN7SKP227-201ENST00000364445 330 ntBASIC3.73□□□□□ -1.81
LDB3O75112 Y_RNA.256-201ENST00000364594 104 ntBASIC3.73□□□□□ -1.81
LDB3O75112 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.73□□□□□ -1.81
LDB3O75112 SNORD115-47-201ENST00000391226 86 ntBASIC3.73□□□□□ -1.81
LDB3O75112 RPL17P50-201ENST00000396131 546 ntBASIC3.73□□□□□ -1.81
LDB3O75112 AC016769.3-201ENST00000396562 315 ntBASIC3.73□□□□□ -1.81
LDB3O75112 AL121972.1-201ENST00000402023 252 ntBASIC3.73□□□□□ -1.81
LDB3O75112 AL024474.1-201ENST00000404655 591 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms