Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 AC010680.1-201ENST00000590024 3590 ntBASIC2.14□□□□□ -2.07
HMGB3O15347 AC000403.1-201ENST00000613696 3585 ntBASIC2.14□□□□□ -2.07
HMGB3O15347 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.14□□□□□ -2.07
HMGB3O15347 AC123912.3-201ENST00000600907 1367 ntBASIC2.14□□□□□ -2.07
HMGB3O15347 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
HMGB3O15347 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.14□□□□□ -2.07
HMGB3O15347 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
HMGB3O15347 RNU6-821P-201ENST00000390995 107 ntBASIC2.14□□□□□ -2.07
HMGB3O15347 MTND4LP20-201ENST00000402379 270 ntBASIC2.14□□□□□ -2.07
HMGB3O15347 Z86062.1-201ENST00000406773 777 ntBASIC2.14□□□□□ -2.07
HMGB3O15347 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.14□□□□□ -2.07
HMGB3O15347 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.14□□□□□ -2.07
HMGB3O15347 AC005300.1-201ENST00000428401 373 ntBASIC2.14□□□□□ -2.07
HMGB3O15347 AC127537.2-201ENST00000439258 465 ntBASIC2.14□□□□□ -2.07
HMGB3O15347 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.14□□□□□ -2.07
HMGB3O15347 AL671855.1-201ENST00000446875 1203 ntBASIC2.14□□□□□ -2.07
HMGB3O15347 SNRPGP6-201ENST00000451124 220 ntBASIC2.14□□□□□ -2.07
HMGB3O15347 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.14□□□□□ -2.07
HMGB3O15347 BTF3P5-201ENST00000457252 467 ntBASIC2.14□□□□□ -2.07
HMGB3O15347 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.14□□□□□ -2.07
HMGB3O15347 AC135721.1-201ENST00000497954 479 ntBASIC2.14□□□□□ -2.07
HMGB3O15347 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.14□□□□□ -2.07
HMGB3O15347 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.14□□□□□ -2.07
HMGB3O15347 AC008885.1-201ENST00000514930 301 ntBASIC2.14□□□□□ -2.07
HMGB3O15347 AC090136.1-201ENST00000520009 240 ntBASIC2.14□□□□□ -2.07
HMGB3O15347 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC2.14□□□□□ -2.07
HMGB3O15347 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.14□□□□□ -2.07
HMGB3O15347 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.14□□□□□ -2.07
HMGB3O15347 AC103810.1-201ENST00000579873 453 ntBASIC2.14□□□□□ -2.07
HMGB3O15347 AL160237.3-201ENST00000604114 1013 ntBASIC2.14□□□□□ -2.07
HMGB3O15347 AC025588.3-201ENST00000604182 274 ntBASIC2.14□□□□□ -2.07
HMGB3O15347 AL161756.2-201ENST00000604597 246 ntBASIC2.14□□□□□ -2.07
HMGB3O15347 AC018618.2-201ENST00000604770 446 ntBASIC2.14□□□□□ -2.07
HMGB3O15347 AL162274.2-201ENST00000614406 332 ntBASIC2.14□□□□□ -2.07
HMGB3O15347 AC034102.8-201ENST00000615146 484 ntBASIC2.14□□□□□ -2.07
HMGB3O15347 AC015967.1-201ENST00000619893 476 ntBASIC2.14□□□□□ -2.07
HMGB3O15347 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
HMGB3O15347 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
HMGB3O15347 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
HMGB3O15347 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.13□□□□□ -2.07
HMGB3O15347 SNORA67.1-201ENST00000364749 141 ntBASIC2.13□□□□□ -2.07
HMGB3O15347 RNU6-1074P-201ENST00000383995 104 ntBASIC2.13□□□□□ -2.07
HMGB3O15347 MIR554-201ENST00000384874 96 ntBASIC2.13□□□□□ -2.07
HMGB3O15347 FABP12P1-201ENST00000401911 322 ntBASIC2.13□□□□□ -2.07
HMGB3O15347 RNA5SP181-201ENST00000410246 98 ntBASIC2.13□□□□□ -2.07
HMGB3O15347 AC007064.1-201ENST00000412238 351 ntBASIC2.13□□□□□ -2.07
HMGB3O15347 TMEM167AP1-201ENST00000423409 219 ntBASIC2.13□□□□□ -2.07
HMGB3O15347 CR769767.1-201ENST00000436337 346 ntBASIC2.13□□□□□ -2.07
HMGB3O15347 AL590762.3-201ENST00000436372 640 ntBASIC2.13□□□□□ -2.07
HMGB3O15347 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.13□□□□□ -2.07
HMGB3O15347 OR6K5P-201ENST00000447050 945 ntBASIC2.13□□□□□ -2.07
HMGB3O15347 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.13□□□□□ -2.07
HMGB3O15347 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.13□□□□□ -2.07
HMGB3O15347 RPL23AP70-201ENST00000483361 460 ntBASIC2.13□□□□□ -2.07
HMGB3O15347 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2.13□□□□□ -2.07
HMGB3O15347 MLLT10P2-201ENST00000506434 249 ntBASIC2.13□□□□□ -2.07
HMGB3O15347 CBX3P3-201ENST00000508108 532 ntBASIC2.13□□□□□ -2.07
HMGB3O15347 AC092593.2-201ENST00000513866 913 ntBASIC2.13□□□□□ -2.07
HMGB3O15347 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.13□□□□□ -2.07
HMGB3O15347 RN7SKP57-201ENST00000517248 293 ntBASIC2.13□□□□□ -2.07
HMGB3O15347 HMGB1P41-201ENST00000520234 440 ntBASIC2.13□□□□□ -2.07
HMGB3O15347 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.13□□□□□ -2.07
HMGB3O15347 AP000867.2-201ENST00000532468 320 ntBASIC2.13□□□□□ -2.07
HMGB3O15347 AC126177.3-201ENST00000551839 688 ntBASIC2.13□□□□□ -2.07
HMGB3O15347 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC2.13□□□□□ -2.07
HMGB3O15347 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.13□□□□□ -2.07
HMGB3O15347 BNIP3P11-201ENST00000603878 563 ntBASIC2.13□□□□□ -2.07
HMGB3O15347 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.13□□□□□ -2.07
HMGB3O15347 AC106028.5-201ENST00000610332 395 ntBASIC2.13□□□□□ -2.07
HMGB3O15347 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.13□□□□□ -2.07
HMGB3O15347 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.13□□□□□ -2.07
HMGB3O15347 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.13□□□□□ -2.07
HMGB3O15347 AL356863.1-201ENST00000623378 1080 ntBASIC2.13□□□□□ -2.07
HMGB3O15347 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.13□□□□□ -2.07
HMGB3O15347 AC068620.4-201ENST00000636730 1182 ntBASIC2.13□□□□□ -2.07
HMGB3O15347 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HMGB3O15347 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
HMGB3O15347 AC109315.1-201ENST00000584143 1347 ntBASIC2.13□□□□□ -2.07
HMGB3O15347 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.12□□□□□ -2.07
HMGB3O15347 Z82209.1-201ENST00000422141 2135 ntBASIC2.12□□□□□ -2.07
HMGB3O15347 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.12□□□□□ -2.07
HMGB3O15347 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC2.12□□□□□ -2.07
HMGB3O15347 RNU4-23P-201ENST00000362839 140 ntBASIC2.12□□□□□ -2.07
HMGB3O15347 RNU6-730P-201ENST00000383954 104 ntBASIC2.12□□□□□ -2.07
HMGB3O15347 MIR7-1-201ENST00000384871 110 ntBASIC2.12□□□□□ -2.07
HMGB3O15347 MIR493-201ENST00000385254 89 ntBASIC2.12□□□□□ -2.07
HMGB3O15347 RPS4XP7-201ENST00000406274 780 ntBASIC2.12□□□□□ -2.07
HMGB3O15347 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC2.12□□□□□ -2.07
HMGB3O15347 MORF4L1P6-201ENST00000418771 268 ntBASIC2.12□□□□□ -2.07
HMGB3O15347 AC008280.1-201ENST00000418851 412 ntBASIC2.12□□□□□ -2.07
HMGB3O15347 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.12□□□□□ -2.07
HMGB3O15347 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.12□□□□□ -2.07
HMGB3O15347 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.12□□□□□ -2.07
HMGB3O15347 AC112492.1-201ENST00000449607 712 ntBASIC2.12□□□□□ -2.07
HMGB3O15347 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.12□□□□□ -2.07
HMGB3O15347 CACYBPP2-201ENST00000453625 678 ntBASIC2.12□□□□□ -2.07
HMGB3O15347 RBM43P1-201ENST00000476891 1081 ntBASIC2.12□□□□□ -2.07
HMGB3O15347 RPS27P27-201ENST00000498779 255 ntBASIC2.12□□□□□ -2.07
HMGB3O15347 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.12□□□□□ -2.07
HMGB3O15347 AC025768.1-201ENST00000510057 267 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms