Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
LINC01549A6NIU2 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.45□□□□□ -2.18
LINC01549A6NIU2 AC024614.2-201ENST00000577584 372 ntBASIC1.45□□□□□ -2.18
LINC01549A6NIU2 MIR3158-1-201ENST00000583596 81 ntBASIC1.45□□□□□ -2.18
LINC01549A6NIU2 AC245100.7-201ENST00000609678 442 ntBASIC1.45□□□□□ -2.18
LINC01549A6NIU2 OR8B1P-202ENST00000641132 1178 ntBASIC1.45□□□□□ -2.18
LINC01549A6NIU2 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.45□□□□□ -2.18
LINC01549A6NIU2 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.45□□□□□ -2.18
LINC01549A6NIU2 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.45□□□□□ -2.18
LINC01549A6NIU2 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
LINC01549A6NIU2 AC007342.9-201ENST00000623877 1385 ntBASIC1.45□□□□□ -2.18
LINC01549A6NIU2 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
LINC01549A6NIU2 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
LINC01549A6NIU2 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
LINC01549A6NIU2 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC1.44□□□□□ -2.18
LINC01549A6NIU2 SNORA46.1-201ENST00000391069 153 ntBASIC1.44□□□□□ -2.18
LINC01549A6NIU2 AP002784.2-201ENST00000397300 549 ntBASIC1.44□□□□□ -2.18
LINC01549A6NIU2 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.44□□□□□ -2.18
LINC01549A6NIU2 AL137014.1-201ENST00000420490 1226 ntBASIC1.44□□□□□ -2.18
LINC01549A6NIU2 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.44□□□□□ -2.18
LINC01549A6NIU2 AC091390.1-201ENST00000433904 331 ntBASIC1.44□□□□□ -2.18
LINC01549A6NIU2 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC1.44□□□□□ -2.18
LINC01549A6NIU2 AL591719.1-201ENST00000444669 744 ntBASIC1.44□□□□□ -2.18
LINC01549A6NIU2 RPL6P5-201ENST00000445678 828 ntBASIC1.44□□□□□ -2.18
LINC01549A6NIU2 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.44□□□□□ -2.18
LINC01549A6NIU2 CAB39P1-201ENST00000502277 460 ntBASIC1.44□□□□□ -2.18
LINC01549A6NIU2 KLRA1P-201ENST00000503499 986 ntBASIC1.44□□□□□ -2.18
LINC01549A6NIU2 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC1.44□□□□□ -2.18
LINC01549A6NIU2 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.44□□□□□ -2.18
LINC01549A6NIU2 RNU2-44P-201ENST00000516795 194 ntBASIC1.44□□□□□ -2.18
LINC01549A6NIU2 RNA5SP471-201ENST00000516971 106 ntBASIC1.44□□□□□ -2.18
LINC01549A6NIU2 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.44□□□□□ -2.18
LINC01549A6NIU2 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.44□□□□□ -2.18
LINC01549A6NIU2 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC1.44□□□□□ -2.18
LINC01549A6NIU2 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.44□□□□□ -2.18
LINC01549A6NIU2 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC1.44□□□□□ -2.18
LINC01549A6NIU2 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.44□□□□□ -2.18
LINC01549A6NIU2 AC245036.5-201ENST00000596330 847 ntBASIC1.44□□□□□ -2.18
LINC01549A6NIU2 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC1.44□□□□□ -2.18
LINC01549A6NIU2 AC008749.1-201ENST00000597650 306 ntBASIC1.44□□□□□ -2.18
LINC01549A6NIU2 AC079880.2-201ENST00000603790 1213 ntBASIC1.44□□□□□ -2.18
LINC01549A6NIU2 NR1H5P-201ENST00000452683 1377 ntBASIC1.44□□□□□ -2.18
LINC01549A6NIU2 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.44□□□□□ -2.18
LINC01549A6NIU2 AL354685.2-201ENST00000448218 1447 ntBASIC1.43□□□□□ -2.18
LINC01549A6NIU2 AL445529.1-201ENST00000398713 389 ntBASIC1.43□□□□□ -2.18
LINC01549A6NIU2 ZNF90P2-204ENST00000419323 1075 ntBASIC1.43□□□□□ -2.18
LINC01549A6NIU2 AC114973.1-201ENST00000429057 632 ntBASIC1.43□□□□□ -2.18
LINC01549A6NIU2 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.43□□□□□ -2.18
LINC01549A6NIU2 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.43□□□□□ -2.18
LINC01549A6NIU2 AC107083.1-201ENST00000439643 279 ntBASIC1.43□□□□□ -2.18
LINC01549A6NIU2 GPM6BP3-201ENST00000442797 145 ntBASIC1.43□□□□□ -2.18
LINC01549A6NIU2 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.43□□□□□ -2.18
LINC01549A6NIU2 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.43□□□□□ -2.18
LINC01549A6NIU2 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.43□□□□□ -2.18
LINC01549A6NIU2 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.43□□□□□ -2.18
LINC01549A6NIU2 RPL23AP41-201ENST00000484754 458 ntBASIC1.43□□□□□ -2.18
LINC01549A6NIU2 AC011825.1-201ENST00000484967 388 ntBASIC1.43□□□□□ -2.18
LINC01549A6NIU2 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
LINC01549A6NIU2 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
LINC01549A6NIU2 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.43□□□□□ -2.18
LINC01549A6NIU2 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.43□□□□□ -2.18
LINC01549A6NIU2 RPL7P20-201ENST00000520308 745 ntBASIC1.43□□□□□ -2.18
LINC01549A6NIU2 HIGD1AP18-201ENST00000520730 278 ntBASIC1.43□□□□□ -2.18
LINC01549A6NIU2 AC083923.1-201ENST00000523708 376 ntBASIC1.43□□□□□ -2.18
LINC01549A6NIU2 AL049838.1-201ENST00000563647 981 ntBASIC1.43□□□□□ -2.18
LINC01549A6NIU2 AC090897.2-201ENST00000581715 130 ntBASIC1.43□□□□□ -2.18
LINC01549A6NIU2 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.43□□□□□ -2.18
LINC01549A6NIU2 AL035413.2-201ENST00000604801 525 ntBASIC1.43□□□□□ -2.18
LINC01549A6NIU2 AC046143.2-201ENST00000609789 160 ntBASIC1.43□□□□□ -2.18
LINC01549A6NIU2 MIR6817-201ENST00000615588 66 ntBASIC1.43□□□□□ -2.18
LINC01549A6NIU2 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.43□□□□□ -2.18
LINC01549A6NIU2 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
LINC01549A6NIU2 AC026951.1-201ENST00000559530 2459 ntBASIC1.42□□□□□ -2.18
LINC01549A6NIU2 DEFB109C-201ENST00000382575 264 ntBASIC1.42□□□□□ -2.18
LINC01549A6NIU2 DEFB109B-201ENST00000382656 264 ntBASIC1.42□□□□□ -2.18
LINC01549A6NIU2 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
LINC01549A6NIU2 RNA5SP184-201ENST00000411071 108 ntBASIC1.42□□□□□ -2.18
LINC01549A6NIU2 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC1.42□□□□□ -2.18
LINC01549A6NIU2 HMGN2P19-201ENST00000425149 265 ntBASIC1.42□□□□□ -2.18
LINC01549A6NIU2 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.42□□□□□ -2.18
LINC01549A6NIU2 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC1.42□□□□□ -2.18
LINC01549A6NIU2 RN7SKP31-201ENST00000516354 278 ntBASIC1.42□□□□□ -2.18
LINC01549A6NIU2 RN7SKP5-201ENST00000517045 272 ntBASIC1.42□□□□□ -2.18
LINC01549A6NIU2 HMGN1P28-201ENST00000521340 364 ntBASIC1.42□□□□□ -2.18
LINC01549A6NIU2 COX6CP5-201ENST00000527162 228 ntBASIC1.42□□□□□ -2.18
LINC01549A6NIU2 HIGD1AP5-201ENST00000529959 259 ntBASIC1.42□□□□□ -2.18
LINC01549A6NIU2 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.42□□□□□ -2.18
LINC01549A6NIU2 AC126177.3-201ENST00000551839 688 ntBASIC1.42□□□□□ -2.18
LINC01549A6NIU2 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
LINC01549A6NIU2 AC006133.1-201ENST00000617106 264 ntBASIC1.42□□□□□ -2.18
LINC01549A6NIU2 AC012640.5-201ENST00000623897 319 ntBASIC1.42□□□□□ -2.18
LINC01549A6NIU2 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.42□□□□□ -2.18
LINC01549A6NIU2 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
LINC01549A6NIU2 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
LINC01549A6NIU2 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
LINC01549A6NIU2 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
LINC01549A6NIU2 RNA5SP479-201ENST00000364858 117 ntBASIC1.41□□□□□ -2.18
LINC01549A6NIU2 CRP-202ENST00000368110 667 ntTSL 3 BASIC1.41□□□□□ -2.18
LINC01549A6NIU2 RNU6-1072P-201ENST00000384703 107 ntBASIC1.41□□□□□ -2.18
LINC01549A6NIU2 RNU6-443P-201ENST00000384780 107 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms