Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 RNA5SP103-201ENST00000459503 118 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 RPS20P21-201ENST00000466859 343 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 AL139099.1-201ENST00000497398 403 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 AC138832.1-201ENST00000522871 556 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 MIR3936-201ENST00000584304 110 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 MIR5684-201ENST00000585074 65 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 VN1R79P-201ENST00000593540 513 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 AC005000.2-201ENST00000605468 310 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 SNORA51-201ENST00000606420 132 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 MIR6500-201ENST00000622700 86 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 AC005539.1-201ENST00000443768 1479 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 AC097634.1-201ENST00000604491 2467 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 METTL21EP-201ENST00000298105 713 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 Y_RNA.1-201ENST00000352915 104 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 Y_RNA.144-201ENST00000363521 113 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 SNORD81.2-201ENST00000365153 76 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 Y_RNA.431-201ENST00000384086 102 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 AL691449.1-201ENST00000426570 421 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 AC092170.1-201ENST00000440211 356 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 AC002542.1-201ENST00000440683 193 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 HMGB3P9-201ENST00000441799 583 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 NANOGP10-201ENST00000453325 895 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 AL035407.2-201ENST00000454090 378 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 RPL23AP81-201ENST00000455252 467 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 AC079804.1-201ENST00000461922 436 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 RPL7P22-201ENST00000466005 733 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 AP000797.1-201ENST00000478870 387 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 ACTG1P13-201ENST00000486987 1043 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 Y_RNA.704-201ENST00000516851 102 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 MIR4513-201ENST00000581077 86 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 AC010201.1-201ENST00000605051 540 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 MIR7975-201ENST00000619350 68 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 AC136475.10-201ENST00000620253 385 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 TPTEP1-208ENST00000636884 213 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 USP9YP4-201ENST00000424401 1745 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
NOTCH3Q9UM47 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
NOTCH3Q9UM47 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.15□□□□□ -1.9
NOTCH3Q9UM47 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
NOTCH3Q9UM47 RNU6-1331P-201ENST00000363658 106 ntBASIC3.15□□□□□ -1.9
NOTCH3Q9UM47 RNU6-549P-201ENST00000384433 107 ntBASIC3.15□□□□□ -1.9
NOTCH3Q9UM47 MT-TG-201ENST00000387429 68 ntBASIC3.15□□□□□ -1.9
NOTCH3Q9UM47 SNORD65-201ENST00000391079 73 ntBASIC3.15□□□□□ -1.9
NOTCH3Q9UM47 MTCO3P40-201ENST00000392516 676 ntBASIC3.15□□□□□ -1.9
NOTCH3Q9UM47 AC009161.1-201ENST00000417306 376 ntBASIC3.15□□□□□ -1.9
NOTCH3Q9UM47 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.15□□□□□ -1.9
NOTCH3Q9UM47 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.15□□□□□ -1.9
NOTCH3Q9UM47 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC3.15□□□□□ -1.9
NOTCH3Q9UM47 MRPL50P4-201ENST00000446432 475 ntBASIC3.15□□□□□ -1.9
NOTCH3Q9UM47 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.15□□□□□ -1.9
NOTCH3Q9UM47 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.15□□□□□ -1.9
NOTCH3Q9UM47 RPL38P1-201ENST00000460914 211 ntBASIC3.15□□□□□ -1.9
NOTCH3Q9UM47 RPL23AP65-201ENST00000475608 468 ntBASIC3.15□□□□□ -1.9
NOTCH3Q9UM47 RN7SL323P-201ENST00000494712 295 ntBASIC3.15□□□□□ -1.9
NOTCH3Q9UM47 SETP14-201ENST00000497538 873 ntBASIC3.15□□□□□ -1.9
NOTCH3Q9UM47 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.15□□□□□ -1.9
NOTCH3Q9UM47 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.15□□□□□ -1.9
NOTCH3Q9UM47 AC239860.2-201ENST00000525886 270 ntBASIC3.15□□□□□ -1.9
NOTCH3Q9UM47 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.15□□□□□ -1.9
NOTCH3Q9UM47 AL512360.1-201ENST00000555346 234 ntBASIC3.15□□□□□ -1.9
NOTCH3Q9UM47 AL603758.1-201ENST00000618654 241 ntBASIC3.15□□□□□ -1.9
NOTCH3Q9UM47 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.15□□□□□ -1.9
NOTCH3Q9UM47 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
NOTCH3Q9UM47 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
NOTCH3Q9UM47 OR4G1P-202ENST00000641173 1788 ntBASIC3.15□□□□□ -1.9
NOTCH3Q9UM47 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms