Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 OR11H4-201ENST00000315409 1082 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 RN7SKP280-201ENST00000364196 304 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 RNU1-132P-201ENST00000364300 164 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 Y_RNA.387-201ENST00000383918 102 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 SNORA32.2-201ENST00000384049 122 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 SNORD115.1-201ENST00000391109 76 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 AL590290.1-201ENST00000405336 380 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 RNA5SP317-201ENST00000410176 116 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 RNA5SP311-201ENST00000411290 116 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 MTND3P8-201ENST00000412909 339 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 E2F6P2-201ENST00000420708 748 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.88□□□□□ -1.47
ATG3Q9NT62 AC099336.2-201ENST00000422457 254 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC5.88□□□□□ -1.47
ATG3Q9NT62 RPL21P110-201ENST00000433345 446 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 SKP1P1-201ENST00000438081 489 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 HMGB1P18-201ENST00000438801 619 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.88□□□□□ -1.47
ATG3Q9NT62 PHBP16-201ENST00000446318 950 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 ISCUP1-201ENST00000454451 448 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 AC099560.2-201ENST00000457554 255 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 AC053481.1-201ENST00000467217 306 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ATG3Q9NT62 UQCRHP4-201ENST00000471686 272 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.88□□□□□ -1.47
ATG3Q9NT62 AC023194.1-201ENST00000493084 308 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.88□□□□□ -1.47
ATG3Q9NT62 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.88□□□□□ -1.47
ATG3Q9NT62 AC098799.3-201ENST00000506095 438 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 POU5F1P7-201ENST00000508759 541 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 RNA5SP216-201ENST00000516111 123 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 RNA5SP315-201ENST00000516340 116 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 RNA5SP312-201ENST00000517068 116 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 HMGB1P23-201ENST00000518743 568 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC5.88□□□□□ -1.47
ATG3Q9NT62 PSMA2P1-201ENST00000526365 646 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 ZNF705CP-201ENST00000530515 889 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 AC087241.2-201ENST00000535801 324 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 AC018630.1-201ENST00000541376 925 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.88□□□□□ -1.47
ATG3Q9NT62 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.88□□□□□ -1.47
ATG3Q9NT62 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.88□□□□□ -1.47
ATG3Q9NT62 AC034105.4-201ENST00000568304 277 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 RN7SL176P-201ENST00000580352 264 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.88□□□□□ -1.47
ATG3Q9NT62 IPO5P1-202ENST00000600039 287 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 MIR98-201ENST00000606724 119 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 AC091979.2-201ENST00000607514 214 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 AP004247.3-201ENST00000608682 624 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 DISC2.1-201ENST00000612827 205 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 AC233309.1-201ENST00000619522 751 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 AC040168.1-201ENST00000623594 991 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 AC231657.1-201ENST00000624313 397 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.88□□□□□ -1.47
ATG3Q9NT62 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
ATG3Q9NT62 OR2L1P-202ENST00000641567 1023 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ATG3Q9NT62 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
ATG3Q9NT62 AL122126.1-201ENST00000546905 1318 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC5.88□□□□□ -1.47
ATG3Q9NT62 AP001350.1-201ENST00000601906 1524 ntBASIC5.88□□□□□ -1.47
ATG3Q9NT62 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.88□□□□□ -1.47
ATG3Q9NT62 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ATG3Q9NT62 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
ATG3Q9NT62 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
ATG3Q9NT62 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ATG3Q9NT62 Y_RNA.231-201ENST00000364358 102 ntBASIC5.87□□□□□ -1.47
ATG3Q9NT62 SNORA22B-201ENST00000383876 138 ntBASIC5.87□□□□□ -1.47
ATG3Q9NT62 RNU1-13P-201ENST00000384499 162 ntBASIC5.87□□□□□ -1.47
ATG3Q9NT62 MIR92A2-201ENST00000385299 75 ntBASIC5.87□□□□□ -1.47
ATG3Q9NT62 RPS26P8-201ENST00000393490 348 ntBASIC5.87□□□□□ -1.47
ATG3Q9NT62 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ATG3Q9NT62 RPS4XP8-201ENST00000402039 771 ntBASIC5.87□□□□□ -1.47
ATG3Q9NT62 AP000580.1-201ENST00000404439 358 ntBASIC5.87□□□□□ -1.47
ATG3Q9NT62 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC5.87□□□□□ -1.47
ATG3Q9NT62 AL136133.1-201ENST00000413694 376 ntBASIC5.87□□□□□ -1.47
ATG3Q9NT62 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC5.87□□□□□ -1.47
ATG3Q9NT62 AL139095.3-201ENST00000419672 1203 ntBASIC5.87□□□□□ -1.47
ATG3Q9NT62 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.87□□□□□ -1.47
ATG3Q9NT62 RPEP2-201ENST00000432149 701 ntBASIC5.87□□□□□ -1.47
ATG3Q9NT62 IFNA20P-201ENST00000436840 528 ntBASIC5.87□□□□□ -1.47
ATG3Q9NT62 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC5.87□□□□□ -1.47
ATG3Q9NT62 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ATG3Q9NT62 RPL23AP43-201ENST00000446445 471 ntBASIC5.87□□□□□ -1.47
ATG3Q9NT62 RPL7P59-201ENST00000447700 943 ntBASIC5.87□□□□□ -1.47
ATG3Q9NT62 AL359073.1-201ENST00000448036 403 ntBASIC5.87□□□□□ -1.47
ATG3Q9NT62 MTCO1P27-201ENST00000448269 226 ntBASIC5.87□□□□□ -1.47
ATG3Q9NT62 MTCO2P29-201ENST00000465212 189 ntBASIC5.87□□□□□ -1.47
ATG3Q9NT62 MTND4P17-201ENST00000470444 350 ntBASIC5.87□□□□□ -1.47
ATG3Q9NT62 AC005741.1-201ENST00000511094 432 ntBASIC5.87□□□□□ -1.47
ATG3Q9NT62 MEPE-206ENST00000511670 550 ntTSL 4 BASIC5.87□□□□□ -1.47
ATG3Q9NT62 AC017037.2-201ENST00000513850 890 ntBASIC5.87□□□□□ -1.47
ATG3Q9NT62 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.87□□□□□ -1.47
ATG3Q9NT62 AC068587.4-201ENST00000533893 186 ntBASIC5.87□□□□□ -1.47
ATG3Q9NT62 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.87□□□□□ -1.47
ATG3Q9NT62 MIR4742-201ENST00000581069 85 ntBASIC5.87□□□□□ -1.47
ATG3Q9NT62 MIR3149-201ENST00000584629 83 ntBASIC5.87□□□□□ -1.47
ATG3Q9NT62 PSMA6P4-201ENST00000603247 718 ntBASIC5.87□□□□□ -1.47
ATG3Q9NT62 AL591034.3-201ENST00000605511 685 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms