Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 OR5J1P-201ENST00000313544 939 ntBASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 RNU6-317P-201ENST00000384031 107 ntBASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 RNU6-629P-201ENST00000384061 103 ntBASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 MIR34A-201ENST00000385130 110 ntBASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 AC007064.1-201ENST00000412238 351 ntBASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 NUP35P2-201ENST00000416748 943 ntBASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 MTCYBP24-201ENST00000420387 1106 ntBASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 AC063976.3-201ENST00000426849 329 ntBASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 AC092427.1-202ENST00000430569 476 ntBASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 FCF1P1-201ENST00000432690 571 ntBASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 MTCYBP29-201ENST00000436327 1006 ntBASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 AC000041.1-201ENST00000439655 175 ntBASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 TRBV26-201ENST00000456572 344 ntBASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 AL031183.1-201ENST00000457667 207 ntBASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 XKRY-201ENST00000510392 1100 ntBASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 HMGB3P3-201ENST00000510526 400 ntBASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 AC026436.1-201ENST00000510537 270 ntBASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 AC105914.1-201ENST00000511798 226 ntBASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 TTC39CP1-201ENST00000512513 755 ntBASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 HIGD1AP3-201ENST00000515857 278 ntBASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 IGLV3-17-201ENST00000519099 244 ntBASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 SUB1P1-201ENST00000524415 382 ntBASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 AP000889.2-201ENST00000532684 490 ntBASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 AC078814.3-201ENST00000553036 491 ntBASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 MIR1254-2-201ENST00000579553 63 ntBASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 COX6CP3-201ENST00000580869 223 ntBASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 AC012468.1-201ENST00000604888 430 ntBASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 AC239803.2-201ENST00000610161 430 ntBASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 AC006329.2-201ENST00000611491 394 ntBASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 AC020923.1-201ENST00000624021 917 ntBASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.62□□□□□ -2.15
CDC42SE2Q9NRR3 AC012321.1-201ENST00000561622 1588 ntBASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 SNORD46.1-201ENST00000364139 104 ntBASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 MIR23B-201ENST00000384832 97 ntBASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 AC008280.1-201ENST00000418851 412 ntBASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 FNDC3CP-201ENST00000420795 1155 ntBASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 AC091390.3-201ENST00000426478 338 ntBASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 AC096632.1-201ENST00000427395 310 ntBASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 RPL31P20-201ENST00000449593 360 ntBASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 AC010285.1-201ENST00000470580 392 ntBASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 RBM43P1-201ENST00000476891 1081 ntBASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 LINC00888-204ENST00000487386 421 ntBASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 AC107222.1-201ENST00000510899 637 ntBASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 RAC1P5-201ENST00000512182 576 ntBASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 RNA5SP471-201ENST00000516971 106 ntBASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 MTND4LP24-201ENST00000572277 291 ntBASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 MIR5694-201ENST00000581190 76 ntBASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 VN1R90P-201ENST00000595717 726 ntBASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 AL035413.2-201ENST00000604801 525 ntBASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
CDC42SE2Q9NRR3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC1.6□□□□□ -2.15
CDC42SE2Q9NRR3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.6□□□□□ -2.15
CDC42SE2Q9NRR3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
CDC42SE2Q9NRR3 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
CDC42SE2Q9NRR3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CDC42SE2Q9NRR3 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CDC42SE2Q9NRR3 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CDC42SE2Q9NRR3 MIR518C-201ENST00000384822 101 ntBASIC1.6□□□□□ -2.15
CDC42SE2Q9NRR3 RNA5SP498-201ENST00000411342 120 ntBASIC1.6□□□□□ -2.15
CDC42SE2Q9NRR3 AC096533.1-201ENST00000411645 353 ntBASIC1.6□□□□□ -2.15
CDC42SE2Q9NRR3 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC1.6□□□□□ -2.15
CDC42SE2Q9NRR3 USP9YP27-201ENST00000418455 438 ntBASIC1.6□□□□□ -2.15
CDC42SE2Q9NRR3 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.6□□□□□ -2.15
CDC42SE2Q9NRR3 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms