Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 AP006248.2-201ENST00000623309 592 ntBASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 AC138915.3-201ENST00000562908 1389 ntBASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.25□□□□□ -1.73
AMBRA1Q9C0C7 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 NUP58P1-201ENST00000502546 1738 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 MAPK10-286ENST00000641208 8747 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 AC073544.1-201ENST00000600110 1595 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 OR5J1P-201ENST00000313544 939 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 MIR448-201ENST00000362131 111 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 Y_RNA.70-201ENST00000362886 110 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 RNU6-97P-201ENST00000363387 104 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 RNVU1-3-201ENST00000364313 161 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 Y_RNA.234-201ENST00000364409 97 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 RNU6-534P-201ENST00000364877 106 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 MIR513A2-201ENST00000385249 127 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 MT-TL1-201ENST00000386347 75 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 ENSAP1-201ENST00000392855 326 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 MTND4LP20-201ENST00000402379 270 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 AL049697.2-201ENST00000403708 294 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 RSU1P3-201ENST00000412878 835 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 RPL30P3-201ENST00000424262 333 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 AC019097.1-201ENST00000424783 735 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 NRBF2P3-201ENST00000432731 865 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 RPS20P1-201ENST00000434853 354 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 RPL12P46-201ENST00000436610 195 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 UBE2V1P13-201ENST00000436983 439 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 HLA-N-201ENST00000437516 135 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 AC108734.1-201ENST00000439549 399 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 AL049734.2-201ENST00000441066 616 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 SNRPEP8-201ENST00000442866 260 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 OR1H1P-201ENST00000448731 937 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 AL513533.1-201ENST00000453728 415 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 RPL23AP41-201ENST00000484754 458 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 AC107934.1-201ENST00000522215 217 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 AP001646.1-201ENST00000527936 915 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 AP000907.2-201ENST00000530827 353 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 AC009643.1-201ENST00000532030 391 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 RN7SL652P-201ENST00000577769 300 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 MIR5096-201ENST00000583713 70 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 RPL12P25-202ENST00000598100 674 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 AC068790.4-201ENST00000602474 263 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 AC008638.3-201ENST00000603341 463 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 AL139395.1-201ENST00000603662 160 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 AL049634.3-201ENST00000604968 457 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 AL391813.2-201ENST00000609113 322 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 AC091905.2-201ENST00000623143 306 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 AC005609.4-201ENST00000625071 447 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 SAGE4P-201ENST00000442271 3381 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 CASC19-280ENST00000642102 1351 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 AC016588.2-201ENST00000632484 3021 ntBASIC4.24□□□□□ -1.73
AMBRA1Q9C0C7 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 RNU4-1-201ENST00000363925 141 ntBASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 RNA5SP505-201ENST00000364748 108 ntBASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 RHOT1P2-201ENST00000366423 333 ntBASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 RNU6-877P-201ENST00000383868 107 ntBASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 RNU1-44P-201ENST00000384453 163 ntBASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 RNU6-876P-201ENST00000391295 104 ntBASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 AL603766.1-201ENST00000407763 664 ntBASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 RNU2-15P-201ENST00000410692 191 ntBASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 AMD1P2-201ENST00000412936 992 ntBASIC4.23□□□□□ -1.73
AMBRA1Q9C0C7 RPL18P10-201ENST00000425606 538 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms