Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.47□□□□□ -1.69
NDC1Q9BTX1 MRPL50P2-201ENST00000416821 482 ntBASIC4.47□□□□□ -1.69
NDC1Q9BTX1 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.47□□□□□ -1.69
NDC1Q9BTX1 RGS17P1-201ENST00000423358 553 ntBASIC4.47□□□□□ -1.69
NDC1Q9BTX1 AL606489.2-201ENST00000433886 234 ntBASIC4.47□□□□□ -1.69
NDC1Q9BTX1 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.47□□□□□ -1.69
NDC1Q9BTX1 AC108734.1-201ENST00000439549 399 ntBASIC4.47□□□□□ -1.69
NDC1Q9BTX1 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NDC1Q9BTX1 AL049734.2-201ENST00000441066 616 ntBASIC4.47□□□□□ -1.69
NDC1Q9BTX1 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.47□□□□□ -1.69
NDC1Q9BTX1 ARL2BPP10-201ENST00000446487 531 ntBASIC4.47□□□□□ -1.69
NDC1Q9BTX1 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.47□□□□□ -1.69
NDC1Q9BTX1 AC025164.1-201ENST00000496249 478 ntBASIC4.47□□□□□ -1.69
NDC1Q9BTX1 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.47□□□□□ -1.69
NDC1Q9BTX1 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.47□□□□□ -1.69
NDC1Q9BTX1 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.47□□□□□ -1.69
NDC1Q9BTX1 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.47□□□□□ -1.69
NDC1Q9BTX1 AC010486.1-201ENST00000511793 424 ntBASIC4.47□□□□□ -1.69
NDC1Q9BTX1 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.47□□□□□ -1.69
NDC1Q9BTX1 Y_RNA.675-201ENST00000516389 149 ntBASIC4.47□□□□□ -1.69
NDC1Q9BTX1 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.47□□□□□ -1.69
NDC1Q9BTX1 AC107934.1-201ENST00000522215 217 ntBASIC4.47□□□□□ -1.69
NDC1Q9BTX1 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.47□□□□□ -1.69
NDC1Q9BTX1 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.47□□□□□ -1.69
NDC1Q9BTX1 AP000907.2-201ENST00000530827 353 ntBASIC4.47□□□□□ -1.69
NDC1Q9BTX1 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.47□□□□□ -1.69
NDC1Q9BTX1 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.47□□□□□ -1.69
NDC1Q9BTX1 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.47□□□□□ -1.69
NDC1Q9BTX1 AL109766.1-201ENST00000555080 552 ntBASIC4.47□□□□□ -1.69
NDC1Q9BTX1 AL356432.3-201ENST00000568952 465 ntBASIC4.47□□□□□ -1.69
NDC1Q9BTX1 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.47□□□□□ -1.69
NDC1Q9BTX1 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.47□□□□□ -1.69
NDC1Q9BTX1 RNF138P2-201ENST00000603490 592 ntBASIC4.47□□□□□ -1.69
NDC1Q9BTX1 AC025449.1-201ENST00000603896 529 ntBASIC4.47□□□□□ -1.69
NDC1Q9BTX1 AC005034.5-201ENST00000604219 466 ntBASIC4.47□□□□□ -1.69
NDC1Q9BTX1 AC113194.1-201ENST00000606037 500 ntBASIC4.47□□□□□ -1.69
NDC1Q9BTX1 AC064836.2-201ENST00000609491 462 ntBASIC4.47□□□□□ -1.69
NDC1Q9BTX1 AC015908.5-201ENST00000623289 343 ntBASIC4.47□□□□□ -1.69
NDC1Q9BTX1 AC009161.2-201ENST00000624626 138 ntBASIC4.47□□□□□ -1.69
NDC1Q9BTX1 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.47□□□□□ -1.69
NDC1Q9BTX1 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
NDC1Q9BTX1 MTND5P33-201ENST00000571250 1450 ntBASIC4.47□□□□□ -1.69
NDC1Q9BTX1 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.47□□□□□ -1.69
NDC1Q9BTX1 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NDC1Q9BTX1 AC091046.3-201ENST00000631455 1574 ntBASIC4.47□□□□□ -1.69
NDC1Q9BTX1 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.47□□□□□ -1.69
NDC1Q9BTX1 AL359922.3-201ENST00000624779 1670 ntBASIC4.47□□□□□ -1.69
NDC1Q9BTX1 SALL4P2-201ENST00000423288 2910 ntBASIC4.47□□□□□ -1.69
NDC1Q9BTX1 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.47□□□□□ -1.69
NDC1Q9BTX1 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NDC1Q9BTX1 MFSD8-216ENST00000641147 4009 ntBASIC4.47□□□□□ -1.69
NDC1Q9BTX1 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.47□□□□□ -1.69
NDC1Q9BTX1 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.46□□□□□ -1.69
NDC1Q9BTX1 DHX40P1-201ENST00000588725 1412 ntBASIC4.46□□□□□ -1.69
NDC1Q9BTX1 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.46□□□□□ -1.69
NDC1Q9BTX1 CKAP2P1-201ENST00000555477 2049 ntBASIC4.46□□□□□ -1.69
NDC1Q9BTX1 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.46□□□□□ -1.69
NDC1Q9BTX1 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
NDC1Q9BTX1 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.46□□□□□ -1.7
NDC1Q9BTX1 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
NDC1Q9BTX1 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NDC1Q9BTX1 Y_RNA.72-201ENST00000362894 103 ntBASIC4.46□□□□□ -1.7
NDC1Q9BTX1 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
NDC1Q9BTX1 SNORA20.2-201ENST00000383922 131 ntBASIC4.46□□□□□ -1.7
NDC1Q9BTX1 RNA5SP332-201ENST00000391063 115 ntBASIC4.46□□□□□ -1.7
NDC1Q9BTX1 AL590762.2-201ENST00000395798 571 ntBASIC4.46□□□□□ -1.7
NDC1Q9BTX1 RNA5SP118-201ENST00000410385 109 ntBASIC4.46□□□□□ -1.7
NDC1Q9BTX1 RN7SKP235-201ENST00000410662 305 ntBASIC4.46□□□□□ -1.7
NDC1Q9BTX1 RNU2-15P-201ENST00000410692 191 ntBASIC4.46□□□□□ -1.7
NDC1Q9BTX1 RPS20P15-201ENST00000412792 311 ntBASIC4.46□□□□□ -1.7
NDC1Q9BTX1 EEF1A1P40-201ENST00000412883 573 ntBASIC4.46□□□□□ -1.7
NDC1Q9BTX1 AC007390.1-201ENST00000415722 356 ntBASIC4.46□□□□□ -1.7
NDC1Q9BTX1 E2F6P2-201ENST00000420708 748 ntBASIC4.46□□□□□ -1.7
NDC1Q9BTX1 EIF1P3-201ENST00000423841 334 ntBASIC4.46□□□□□ -1.7
NDC1Q9BTX1 CKS1BP6-201ENST00000424932 240 ntBASIC4.46□□□□□ -1.7
NDC1Q9BTX1 AC119618.1-201ENST00000434191 222 ntBASIC4.46□□□□□ -1.7
NDC1Q9BTX1 UBE2V1P13-201ENST00000436983 439 ntBASIC4.46□□□□□ -1.7
NDC1Q9BTX1 AC004938.1-201ENST00000438468 308 ntBASIC4.46□□□□□ -1.7
NDC1Q9BTX1 AC114495.1-201ENST00000441274 436 ntBASIC4.46□□□□□ -1.7
NDC1Q9BTX1 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.46□□□□□ -1.7
NDC1Q9BTX1 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.46□□□□□ -1.7
NDC1Q9BTX1 CEACAMP6-201ENST00000452007 574 ntBASIC4.46□□□□□ -1.7
NDC1Q9BTX1 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.46□□□□□ -1.7
NDC1Q9BTX1 AL445433.1-201ENST00000457507 257 ntBASIC4.46□□□□□ -1.7
NDC1Q9BTX1 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.46□□□□□ -1.7
NDC1Q9BTX1 snoU13.1-201ENST00000459157 104 ntBASIC4.46□□□□□ -1.7
NDC1Q9BTX1 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.46□□□□□ -1.7
NDC1Q9BTX1 RN7SL385P-201ENST00000468873 276 ntBASIC4.46□□□□□ -1.7
NDC1Q9BTX1 AC139783.2-201ENST00000504847 1145 ntBASIC4.46□□□□□ -1.7
NDC1Q9BTX1 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.46□□□□□ -1.7
NDC1Q9BTX1 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.46□□□□□ -1.7
NDC1Q9BTX1 RNU6-835P-201ENST00000516974 104 ntBASIC4.46□□□□□ -1.7
NDC1Q9BTX1 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.46□□□□□ -1.7
NDC1Q9BTX1 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.46□□□□□ -1.7
NDC1Q9BTX1 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.46□□□□□ -1.7
NDC1Q9BTX1 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.46□□□□□ -1.7
NDC1Q9BTX1 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NDC1Q9BTX1 AC125611.2-201ENST00000551907 647 ntBASIC4.46□□□□□ -1.7
NDC1Q9BTX1 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.46□□□□□ -1.7
NDC1Q9BTX1 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 418.3 ms