Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.62□□□□□ -1.67
LRFN3Q9BTN0 AC079597.1-201ENST00000624306 508 ntBASIC4.62□□□□□ -1.67
LRFN3Q9BTN0 CR381572.1-201ENST00000625098 102 ntBASIC4.62□□□□□ -1.67
LRFN3Q9BTN0 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.62□□□□□ -1.67
LRFN3Q9BTN0 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.62□□□□□ -1.67
LRFN3Q9BTN0 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
LRFN3Q9BTN0 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LRFN3Q9BTN0 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LRFN3Q9BTN0 AP001273.1-201ENST00000624493 3152 ntBASIC4.62□□□□□ -1.67
LRFN3Q9BTN0 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LRFN3Q9BTN0 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LRFN3Q9BTN0 MTND4P12-201ENST00000498999 1377 ntBASIC4.62□□□□□ -1.67
LRFN3Q9BTN0 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LRFN3Q9BTN0 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.62□□□□□ -1.67
LRFN3Q9BTN0 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LRFN3Q9BTN0 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.62□□□□□ -1.67
LRFN3Q9BTN0 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.62□□□□□ -1.67
LRFN3Q9BTN0 AC008079.2-201ENST00000623543 20396 ntBASIC4.62□□□□□ -1.67
LRFN3Q9BTN0 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LRFN3Q9BTN0 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LRFN3Q9BTN0 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.62□□□□□ -1.67
LRFN3Q9BTN0 AC090337.1-201ENST00000579651 2074 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 MTND5P3-201ENST00000438536 1800 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 Y_RNA.234-201ENST00000364409 97 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 Y_RNA.608-201ENST00000410647 95 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 RN7SKP247-201ENST00000411094 308 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 AIMP1P1-201ENST00000418670 937 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 E2F6P2-201ENST00000420708 748 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 AL139413.1-201ENST00000421309 217 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 AL445669.1-201ENST00000426743 755 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 MTND1P9-201ENST00000453775 944 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 Z82190.1-201ENST00000454534 490 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 RPS20P32-201ENST00000456044 356 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 MTND1P11-201ENST00000456661 876 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 BTF3P5-201ENST00000457252 467 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 AC079382.1-201ENST00000493346 557 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 FTH1P21-201ENST00000512179 511 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 RNU6-27P-201ENST00000516146 107 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 AC107954.1-201ENST00000565906 727 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 AC127024.5-201ENST00000580085 462 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 MIR4660-201ENST00000583549 74 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 HMGB2P1-201ENST00000591146 634 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 AC011468.4-201ENST00000603942 409 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 AC004853.1-201ENST00000604902 698 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 AL365503.1-201ENST00000605247 905 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 AC103710.1-201ENST00000610003 901 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 AC131902.3-201ENST00000611767 581 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 AP001506.1-201ENST00000615444 211 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 AC138649.3-201ENST00000622154 254 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 AC091925.2-201ENST00000625059 256 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 MIR6715B-201ENST00000637172 77 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 LRRC77P-213ENST00000637727 880 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 MFSD8-242ENST00000641690 4199 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
LRFN3Q9BTN0 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LRFN3Q9BTN0 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
LRFN3Q9BTN0 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
LRFN3Q9BTN0 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LRFN3Q9BTN0 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
LRFN3Q9BTN0 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.6□□□□□ -1.67
LRFN3Q9BTN0 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.6□□□□□ -1.67
LRFN3Q9BTN0 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LRFN3Q9BTN0 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LRFN3Q9BTN0 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LRFN3Q9BTN0 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.6□□□□□ -1.67
LRFN3Q9BTN0 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.6□□□□□ -1.67
LRFN3Q9BTN0 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LRFN3Q9BTN0 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms