Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 PTGES3P5-201ENST00000455109 434 ntBASIC3.53□□□□□ -1.84
ZNF560Q96MR9 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.53□□□□□ -1.84
ZNF560Q96MR9 AC004062.1-201ENST00000509926 645 ntBASIC3.53□□□□□ -1.84
ZNF560Q96MR9 ARL2BPP6-201ENST00000512757 439 ntBASIC3.53□□□□□ -1.84
ZNF560Q96MR9 RNU6-27P-201ENST00000516146 107 ntBASIC3.53□□□□□ -1.84
ZNF560Q96MR9 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ZNF560Q96MR9 IGHV3-76-201ENST00000522465 295 ntBASIC3.53□□□□□ -1.84
ZNF560Q96MR9 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.53□□□□□ -1.84
ZNF560Q96MR9 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.53□□□□□ -1.84
ZNF560Q96MR9 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.53□□□□□ -1.84
ZNF560Q96MR9 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.53□□□□□ -1.84
ZNF560Q96MR9 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.53□□□□□ -1.84
ZNF560Q96MR9 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.53□□□□□ -1.84
ZNF560Q96MR9 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.53□□□□□ -1.84
ZNF560Q96MR9 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.53□□□□□ -1.84
ZNF560Q96MR9 MIR4425-201ENST00000580572 84 ntBASIC3.53□□□□□ -1.84
ZNF560Q96MR9 MIR5195-201ENST00000583555 115 ntBASIC3.53□□□□□ -1.84
ZNF560Q96MR9 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.53□□□□□ -1.84
ZNF560Q96MR9 BNIP3P24-201ENST00000593398 557 ntBASIC3.53□□□□□ -1.84
ZNF560Q96MR9 BNIP3P27-201ENST00000599991 412 ntBASIC3.53□□□□□ -1.84
ZNF560Q96MR9 AL606834.2-201ENST00000602954 668 ntBASIC3.53□□□□□ -1.84
ZNF560Q96MR9 AC096947.1-201ENST00000603233 470 ntBASIC3.53□□□□□ -1.84
ZNF560Q96MR9 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.53□□□□□ -1.84
ZNF560Q96MR9 AC010738.1-201ENST00000604970 987 ntBASIC3.53□□□□□ -1.84
ZNF560Q96MR9 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.53□□□□□ -1.84
ZNF560Q96MR9 AL450489.1-201ENST00000612071 468 ntBASIC3.53□□□□□ -1.84
ZNF560Q96MR9 uc_338.1-201ENST00000612113 180 ntBASIC3.53□□□□□ -1.84
ZNF560Q96MR9 AC009464.1-201ENST00000615731 469 ntBASIC3.53□□□□□ -1.84
ZNF560Q96MR9 AC091925.2-201ENST00000625059 256 ntBASIC3.53□□□□□ -1.84
ZNF560Q96MR9 MIR7153-201ENST00000637758 57 ntBASIC3.53□□□□□ -1.84
ZNF560Q96MR9 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
ZNF560Q96MR9 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
ZNF560Q96MR9 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
ZNF560Q96MR9 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.52□□□□□ -1.85
ZNF560Q96MR9 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ZNF560Q96MR9 ZNF542P-204ENST00000482727 1305 ntBASIC3.52□□□□□ -1.85
ZNF560Q96MR9 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
ZNF560Q96MR9 RNU1-70P-201ENST00000362618 164 ntBASIC3.52□□□□□ -1.85
ZNF560Q96MR9 RNU6-216P-201ENST00000363282 104 ntBASIC3.52□□□□□ -1.85
ZNF560Q96MR9 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ZNF560Q96MR9 SNORD51-201ENST00000384320 80 ntBASIC3.52□□□□□ -1.85
ZNF560Q96MR9 RNU6-878P-201ENST00000384578 110 ntBASIC3.52□□□□□ -1.85
ZNF560Q96MR9 AL357075.1-201ENST00000404107 726 ntBASIC3.52□□□□□ -1.85
ZNF560Q96MR9 SNORA11.1-201ENST00000408133 129 ntBASIC3.52□□□□□ -1.85
ZNF560Q96MR9 RNA5SP129-201ENST00000410276 118 ntBASIC3.52□□□□□ -1.85
ZNF560Q96MR9 RPL7P44-201ENST00000424827 742 ntBASIC3.52□□□□□ -1.85
ZNF560Q96MR9 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.52□□□□□ -1.85
ZNF560Q96MR9 AC091862.1-201ENST00000438016 1100 ntBASIC3.52□□□□□ -1.85
ZNF560Q96MR9 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.52□□□□□ -1.85
ZNF560Q96MR9 USP9YP34-201ENST00000453983 808 ntBASIC3.52□□□□□ -1.85
ZNF560Q96MR9 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.52□□□□□ -1.85
ZNF560Q96MR9 BX510359.1-201ENST00000456973 237 ntBASIC3.52□□□□□ -1.85
ZNF560Q96MR9 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ZNF560Q96MR9 AC021205.2-201ENST00000480069 347 ntBASIC3.52□□□□□ -1.85
ZNF560Q96MR9 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.52□□□□□ -1.85
ZNF560Q96MR9 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.52□□□□□ -1.85
ZNF560Q96MR9 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.52□□□□□ -1.85
ZNF560Q96MR9 SNORA19.3-201ENST00000516165 130 ntBASIC3.52□□□□□ -1.85
ZNF560Q96MR9 RNA5SP468-201ENST00000516782 93 ntBASIC3.52□□□□□ -1.85
ZNF560Q96MR9 RPL12P22-201ENST00000519073 490 ntBASIC3.52□□□□□ -1.85
ZNF560Q96MR9 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.52□□□□□ -1.85
ZNF560Q96MR9 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.52□□□□□ -1.85
ZNF560Q96MR9 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.52□□□□□ -1.85
ZNF560Q96MR9 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.52□□□□□ -1.85
ZNF560Q96MR9 AC126177.3-201ENST00000551839 688 ntBASIC3.52□□□□□ -1.85
ZNF560Q96MR9 LARP7P2-201ENST00000575306 125 ntBASIC3.52□□□□□ -1.85
ZNF560Q96MR9 MIR5680-201ENST00000577577 84 ntBASIC3.52□□□□□ -1.85
ZNF560Q96MR9 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
ZNF560Q96MR9 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.52□□□□□ -1.85
ZNF560Q96MR9 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.52□□□□□ -1.85
ZNF560Q96MR9 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.52□□□□□ -1.85
ZNF560Q96MR9 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.52□□□□□ -1.85
ZNF560Q96MR9 AC024257.5-201ENST00000612739 531 ntBASIC3.52□□□□□ -1.85
ZNF560Q96MR9 AC023158.2-201ENST00000614876 543 ntBASIC3.52□□□□□ -1.85
ZNF560Q96MR9 MIR7112-201ENST00000616126 65 ntBASIC3.52□□□□□ -1.85
ZNF560Q96MR9 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
ZNF560Q96MR9 AC073348.1-201ENST00000623002 331 ntBASIC3.52□□□□□ -1.85
ZNF560Q96MR9 AC058791.1-201ENST00000608412 3198 ntBASIC3.52□□□□□ -1.85
ZNF560Q96MR9 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
ZNF560Q96MR9 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ZNF560Q96MR9 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.52□□□□□ -1.85
ZNF560Q96MR9 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ZNF560Q96MR9 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.51□□□□□ -1.85
ZNF560Q96MR9 MTND4P34-201ENST00000572715 1371 ntBASIC3.51□□□□□ -1.85
ZNF560Q96MR9 AC107982.1-201ENST00000507171 1300 ntBASIC3.51□□□□□ -1.85
ZNF560Q96MR9 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.51□□□□□ -1.85
ZNF560Q96MR9 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ZNF560Q96MR9 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.51□□□□□ -1.85
ZNF560Q96MR9 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
ZNF560Q96MR9 RNU6-50P-201ENST00000362356 103 ntBASIC3.51□□□□□ -1.85
ZNF560Q96MR9 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
ZNF560Q96MR9 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ZNF560Q96MR9 AC063979.1-201ENST00000415539 377 ntBASIC3.51□□□□□ -1.85
ZNF560Q96MR9 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ZNF560Q96MR9 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.51□□□□□ -1.85
ZNF560Q96MR9 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.51□□□□□ -1.85
ZNF560Q96MR9 RPL31P12-201ENST00000422587 358 ntBASIC3.51□□□□□ -1.85
ZNF560Q96MR9 DUTP6-201ENST00000425573 462 ntBASIC3.51□□□□□ -1.85
ZNF560Q96MR9 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.51□□□□□ -1.85
ZNF560Q96MR9 RPL23AP74-201ENST00000437246 471 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms