Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC138Q96M89 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.3□□□□□ -1.72
CCDC138Q96M89 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC138Q96M89 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CCDC138Q96M89 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC138Q96M89 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC138Q96M89 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CCDC138Q96M89 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC138Q96M89 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC138Q96M89 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC138Q96M89 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC138Q96M89 AC126755.2-208ENST00000327792 462 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 AC138969.1-213ENST00000331436 462 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 AC067945.1-201ENST00000342609 618 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC138Q96M89 RNU6-754P-201ENST00000391166 107 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC138Q96M89 RPS4XP9-201ENST00000405151 780 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 HMGN1P14-201ENST00000412459 517 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC138Q96M89 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC138Q96M89 MORF4L1P6-201ENST00000418771 268 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 AL356387.2-201ENST00000422272 243 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC138Q96M89 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC138Q96M89 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC138Q96M89 AC004866.2-201ENST00000438285 481 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 AL049734.2-201ENST00000441066 616 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 MTCO1P19-201ENST00000443487 500 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC138Q96M89 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC138Q96M89 AC099563.1-201ENST00000456086 418 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 RPS3AP50-201ENST00000487064 803 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 AC020593.1-201ENST00000507399 299 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 AL592156.1-201ENST00000508758 304 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.29□□□□□ -1.72
CCDC138Q96M89 AC015795.1-201ENST00000513669 327 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 RN7SKP244-201ENST00000516513 307 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 RNU6-798P-201ENST00000516912 103 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 PAICSP4-201ENST00000517543 1253 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC138Q96M89 IFITM8P-201ENST00000522529 394 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 SNRPGP16-201ENST00000533275 226 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC138Q96M89 AL133271.1-201ENST00000538229 291 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC138Q96M89 AC022146.1-201ENST00000595307 847 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 AC019193.2-201ENST00000610012 634 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 AC011939.3-201ENST00000613686 466 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 AL355810.1-201ENST00000614629 552 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 AL450472.3-201ENST00000615578 367 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 AC092140.2-201ENST00000618027 521 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 AC243312.2-201ENST00000623340 601 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 AC112204.3-201ENST00000623822 332 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 AC004777.1-201ENST00000624317 287 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 AL603839.4-201ENST00000624658 1005 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC138Q96M89 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CCDC138Q96M89 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC138Q96M89 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC138Q96M89 AC095050.2-201ENST00000510748 1458 ntBASIC4.29□□□□□ -1.72
CCDC138Q96M89 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CCDC138Q96M89 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC138Q96M89 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CCDC138Q96M89 AL138713.1-201ENST00000624026 2130 ntBASIC4.28□□□□□ -1.72
CCDC138Q96M89 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC138Q96M89 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC138Q96M89 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.28□□□□□ -1.72
CCDC138Q96M89 RNU1-32P-201ENST00000363937 159 ntBASIC4.28□□□□□ -1.72
CCDC138Q96M89 FCF1P10-201ENST00000407590 479 ntBASIC4.28□□□□□ -1.72
CCDC138Q96M89 RN7SKP167-201ENST00000411047 285 ntBASIC4.28□□□□□ -1.72
CCDC138Q96M89 RNU2-71P-201ENST00000411395 189 ntBASIC4.28□□□□□ -1.72
CCDC138Q96M89 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC138Q96M89 USP9YP13-201ENST00000417797 480 ntBASIC4.28□□□□□ -1.72
CCDC138Q96M89 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC138Q96M89 AL139095.3-201ENST00000419672 1203 ntBASIC4.28□□□□□ -1.72
CCDC138Q96M89 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC138Q96M89 MTCO2P34-201ENST00000421994 607 ntBASIC4.28□□□□□ -1.72
CCDC138Q96M89 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC138Q96M89 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC138Q96M89 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC138Q96M89 USP9YP29-201ENST00000445112 563 ntBASIC4.28□□□□□ -1.72
CCDC138Q96M89 TPT1P14-201ENST00000448018 505 ntBASIC4.28□□□□□ -1.72
CCDC138Q96M89 DHFRP3-201ENST00000455595 559 ntBASIC4.28□□□□□ -1.72
CCDC138Q96M89 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC138Q96M89 snoU13.1-201ENST00000459157 104 ntBASIC4.28□□□□□ -1.72
CCDC138Q96M89 snoU109.1-201ENST00000459339 135 ntBASIC4.28□□□□□ -1.72
CCDC138Q96M89 RPL7P15-201ENST00000461190 712 ntBASIC4.28□□□□□ -1.72
CCDC138Q96M89 TMED11P-201ENST00000479478 690 ntBASIC4.28□□□□□ -1.72
CCDC138Q96M89 RPL7P24-201ENST00000493052 752 ntBASIC4.28□□□□□ -1.72
CCDC138Q96M89 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC138Q96M89 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC138Q96M89 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC138Q96M89 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC138Q96M89 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC138Q96M89 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC138Q96M89 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC138Q96M89 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC138Q96M89 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms