Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC104472.2-201ENST00000469035 601 ntBASIC2.9□□□□□ -1.95
CCDC112Q8NEF3 SNORA31.20-201ENST00000517111 133 ntBASIC2.9□□□□□ -1.95
CCDC112Q8NEF3 AC008562.1-201ENST00000521763 330 ntBASIC2.9□□□□□ -1.95
CCDC112Q8NEF3 AC090751.1-201ENST00000566966 267 ntBASIC2.9□□□□□ -1.95
CCDC112Q8NEF3 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC112Q8NEF3 AC113368.1-201ENST00000603736 382 ntBASIC2.9□□□□□ -1.95
CCDC112Q8NEF3 AC008962.1-201ENST00000605729 304 ntBASIC2.9□□□□□ -1.95
CCDC112Q8NEF3 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC112Q8NEF3 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC112Q8NEF3 AP000676.4-201ENST00000624659 623 ntBASIC2.9□□□□□ -1.95
CCDC112Q8NEF3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC112Q8NEF3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC112Q8NEF3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC112Q8NEF3 CD24P4-201ENST00000382840 243 ntBASIC2.89□□□□□ -1.95
CCDC112Q8NEF3 RNU6-98P-201ENST00000384173 107 ntBASIC2.89□□□□□ -1.95
CCDC112Q8NEF3 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC112Q8NEF3 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC112Q8NEF3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC112Q8NEF3 AL359893.1-201ENST00000447628 1580 ntBASIC2.89□□□□□ -1.95
CCDC112Q8NEF3 CACYBPP2-201ENST00000453625 678 ntBASIC2.89□□□□□ -1.95
CCDC112Q8NEF3 AL445669.2-201ENST00000454425 421 ntBASIC2.89□□□□□ -1.95
CCDC112Q8NEF3 AP002345.1-201ENST00000456493 928 ntBASIC2.89□□□□□ -1.95
CCDC112Q8NEF3 AIG1P1-201ENST00000503376 148 ntBASIC2.89□□□□□ -1.95
CCDC112Q8NEF3 RNA5SP367-201ENST00000516557 118 ntBASIC2.89□□□□□ -1.95
CCDC112Q8NEF3 AC100870.1-201ENST00000522035 505 ntBASIC2.89□□□□□ -1.95
CCDC112Q8NEF3 OR4V1P-201ENST00000525394 1140 ntBASIC2.89□□□□□ -1.95
CCDC112Q8NEF3 AC019227.1-201ENST00000526902 510 ntBASIC2.89□□□□□ -1.95
CCDC112Q8NEF3 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.89□□□□□ -1.95
CCDC112Q8NEF3 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC112Q8NEF3 OR5BN1P-201ENST00000532955 829 ntBASIC2.89□□□□□ -1.95
CCDC112Q8NEF3 POLR2KP1-201ENST00000553226 168 ntBASIC2.89□□□□□ -1.95
CCDC112Q8NEF3 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC112Q8NEF3 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC112Q8NEF3 AC090695.1-201ENST00000561269 1222 ntBASIC2.89□□□□□ -1.95
CCDC112Q8NEF3 AC107954.1-201ENST00000565906 727 ntBASIC2.89□□□□□ -1.95
CCDC112Q8NEF3 RPL12P50-201ENST00000603116 116 ntBASIC2.89□□□□□ -1.95
CCDC112Q8NEF3 SNHG22-203ENST00000617833 660 ntBASIC2.89□□□□□ -1.95
CCDC112Q8NEF3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC112Q8NEF3 AC233263.6-201ENST00000631132 1963 ntBASIC2.89□□□□□ -1.95
CCDC112Q8NEF3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC112Q8NEF3 FRG1BP-201ENST00000278882 761 ntBASIC2.88□□□□□ -1.95
CCDC112Q8NEF3 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CCDC112Q8NEF3 ANKRD36P1-201ENST00000344424 659 ntBASIC2.88□□□□□ -1.95
CCDC112Q8NEF3 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC112Q8NEF3 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC112Q8NEF3 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC112Q8NEF3 RPS24P13-201ENST00000442520 397 ntBASIC2.88□□□□□ -1.95
CCDC112Q8NEF3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC112Q8NEF3 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC112Q8NEF3 VN1R104P-201ENST00000505115 1009 ntBASIC2.88□□□□□ -1.95
CCDC112Q8NEF3 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC112Q8NEF3 FABP5P6-201ENST00000510588 409 ntBASIC2.88□□□□□ -1.95
CCDC112Q8NEF3 SNORA31.11-201ENST00000516528 139 ntBASIC2.88□□□□□ -1.95
CCDC112Q8NEF3 AC104997.1-201ENST00000519761 717 ntBASIC2.88□□□□□ -1.95
CCDC112Q8NEF3 AC008676.3-201ENST00000521237 435 ntBASIC2.88□□□□□ -1.95
CCDC112Q8NEF3 COX6B1P6-201ENST00000522347 255 ntBASIC2.88□□□□□ -1.95
CCDC112Q8NEF3 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.88□□□□□ -1.95
CCDC112Q8NEF3 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CCDC112Q8NEF3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC112Q8NEF3 AC138761.3-201ENST00000579993 334 ntBASIC2.88□□□□□ -1.95
CCDC112Q8NEF3 AC073387.2-201ENST00000604797 784 ntBASIC2.88□□□□□ -1.95
CCDC112Q8NEF3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC112Q8NEF3 AL645568.2-201ENST00000432815 1337 ntBASIC2.88□□□□□ -1.95
CCDC112Q8NEF3 AL136520.1-201ENST00000600311 1322 ntBASIC2.88□□□□□ -1.95
CCDC112Q8NEF3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
CCDC112Q8NEF3 TAB3P1-202ENST00000452645 1634 ntBASIC2.87□□□□□ -1.95
CCDC112Q8NEF3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC112Q8NEF3 RNU4-23P-201ENST00000362839 140 ntBASIC2.87□□□□□ -1.95
CCDC112Q8NEF3 SNORA14A-201ENST00000364773 135 ntBASIC2.87□□□□□ -1.95
CCDC112Q8NEF3 PRRC2CP1-201ENST00000404428 159 ntBASIC2.87□□□□□ -1.95
CCDC112Q8NEF3 AC010385.1-201ENST00000412374 256 ntBASIC2.87□□□□□ -1.95
CCDC112Q8NEF3 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC112Q8NEF3 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC112Q8NEF3 UBE2D3P2-201ENST00000424409 445 ntBASIC2.87□□□□□ -1.95
CCDC112Q8NEF3 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC112Q8NEF3 MTATP6P4-201ENST00000427725 675 ntBASIC2.87□□□□□ -1.95
CCDC112Q8NEF3 RPL23AP58-201ENST00000440453 469 ntBASIC2.87□□□□□ -1.95
CCDC112Q8NEF3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC112Q8NEF3 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.87□□□□□ -1.95
CCDC112Q8NEF3 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC112Q8NEF3 RPL21P131-201ENST00000497298 483 ntBASIC2.87□□□□□ -1.95
CCDC112Q8NEF3 LY96-202ENST00000518893 430 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC112Q8NEF3 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.87□□□□□ -1.95
CCDC112Q8NEF3 GTF3AP2-201ENST00000557014 266 ntBASIC2.87□□□□□ -1.95
CCDC112Q8NEF3 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC112Q8NEF3 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC112Q8NEF3 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC112Q8NEF3 AP003485.2-201ENST00000623636 610 ntBASIC2.87□□□□□ -1.95
CCDC112Q8NEF3 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.87□□□□□ -1.95
CCDC112Q8NEF3 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.87□□□□□ -1.95
CCDC112Q8NEF3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
CCDC112Q8NEF3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC112Q8NEF3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC112Q8NEF3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC112Q8NEF3 AL512283.1-201ENST00000606756 1384 ntBASIC2.87□□□□□ -1.95
CCDC112Q8NEF3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.86□□□□□ -1.95
CCDC112Q8NEF3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.86□□□□□ -1.95
CCDC112Q8NEF3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CCDC112Q8NEF3 RNU6-263P-201ENST00000363811 107 ntBASIC2.86□□□□□ -1.95
CCDC112Q8NEF3 U8.8-201ENST00000365399 135 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms