Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC50Q8IVM0 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 SNORD82-201ENST00000365530 70 ntBASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 RNU6-657P-201ENST00000383904 107 ntBASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 MIR183-201ENST00000384958 110 ntBASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 RNU6-837P-201ENST00000391056 108 ntBASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 AC013262.1-201ENST00000426710 252 ntBASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 Z93242.1-201ENST00000427102 353 ntBASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 AC092634.2-201ENST00000428146 1010 ntBASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 Z75741.1-201ENST00000446793 314 ntBASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 HMGB1P15-201ENST00000453854 435 ntBASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 OR6K1P-201ENST00000456766 971 ntBASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 MTCO3P2-201ENST00000457365 171 ntBASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 RPL21P104-201ENST00000464143 478 ntBASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 AC008571.1-201ENST00000467232 300 ntBASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 AC109925.1-201ENST00000478069 331 ntBASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 DYNLL1P6-201ENST00000503440 264 ntBASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 DUXAP2-201ENST00000519198 589 ntBASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 MIR4666A-201ENST00000580160 79 ntBASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 AP001542.2-201ENST00000593141 364 ntBASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 AC103881.1-201ENST00000603476 538 ntBASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 ELOCP35-201ENST00000604289 336 ntBASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 AC099785.1-201ENST00000605697 437 ntBASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 AL590282.1-201ENST00000610379 1136 ntBASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 AC006329.2-201ENST00000611491 394 ntBASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 AC008759.3-201ENST00000613300 508 ntBASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 AC138932.5-201ENST00000617759 563 ntBASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 AC012314.7-201ENST00000619693 93 ntBASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 FAM35BP-202ENST00000497389 3337 ntBASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 AL136164.4-201ENST00000625013 2135 ntBASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC50Q8IVM0 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 AC002546.1-201ENST00000588041 2504 ntBASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 AC004925.1-201ENST00000624256 2706 ntBASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 RPL7P25-201ENST00000404151 721 ntBASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 BTF3P8-201ENST00000414577 526 ntBASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 RAD23BP2-201ENST00000416003 1207 ntBASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 AL353678.1-201ENST00000422735 741 ntBASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 RAC1P8-201ENST00000427086 527 ntBASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 AC079780.1-201ENST00000428259 207 ntBASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 AC006028.1-201ENST00000438379 402 ntBASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 RPL23AP16-201ENST00000441715 421 ntBASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 AC016696.1-201ENST00000446949 318 ntBASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 PRDX3P3-201ENST00000447765 522 ntBASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 MRPL42P4-201ENST00000453267 443 ntBASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 TRBV26-201ENST00000456572 344 ntBASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 RPL5P24-201ENST00000463742 885 ntBASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 GAPDHP39-201ENST00000481866 979 ntBASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 RN7SL633P-201ENST00000488974 297 ntBASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 ZNF705CP-201ENST00000530515 889 ntBASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 AP001317.1-201ENST00000531194 960 ntBASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 AC093519.1-201ENST00000566109 298 ntBASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 MIR1254-2-201ENST00000579553 63 ntBASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 UBL5P2-201ENST00000583788 219 ntBASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 AL606834.2-201ENST00000602954 668 ntBASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 MIR6798-201ENST00000612887 67 ntBASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 AC231759.1-201ENST00000616455 597 ntBASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 AC015967.1-201ENST00000619893 476 ntBASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 AC009318.4-201ENST00000620496 486 ntBASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 AC006963.1-201ENST00000624003 1052 ntBASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC50Q8IVM0 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms