Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VRK3Q8IV63 Y_RNA.67-201ENST00000362870 100 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 SNORA69-201ENST00000383895 132 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 RNU6-1158P-201ENST00000391167 107 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 AC127391.1-201ENST00000411737 98 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.36□□□□□ -1.71
VRK3Q8IV63 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.36□□□□□ -1.71
VRK3Q8IV63 TMSB10P2-201ENST00000416049 131 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 CYCSP10-201ENST00000417973 294 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 ELOCP4-201ENST00000420090 333 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 AL353777.1-201ENST00000425552 326 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.36□□□□□ -1.71
VRK3Q8IV63 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.36□□□□□ -1.71
VRK3Q8IV63 AL606489.2-201ENST00000433886 234 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.36□□□□□ -1.71
VRK3Q8IV63 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.36□□□□□ -1.71
VRK3Q8IV63 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.36□□□□□ -1.71
VRK3Q8IV63 MTND6P18-201ENST00000439477 513 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 MRPL50P4-201ENST00000446432 475 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 RPS15AP1-201ENST00000457423 391 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 RPS15AP17-201ENST00000470598 390 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 RPL7P42-201ENST00000481005 679 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 RPL7AP10-201ENST00000481016 791 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC4.36□□□□□ -1.71
VRK3Q8IV63 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.36□□□□□ -1.71
VRK3Q8IV63 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.36□□□□□ -1.71
VRK3Q8IV63 RNU7-30P-201ENST00000516835 62 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 AC104986.1-201ENST00000517978 436 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 AC022616.6-201ENST00000520479 119 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 COX6CP8-201ENST00000522620 226 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 AL358913.1-201ENST00000554342 121 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 ATP5J2P6-201ENST00000565203 266 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.36□□□□□ -1.71
VRK3Q8IV63 MIR5186-201ENST00000577504 120 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.36□□□□□ -1.71
VRK3Q8IV63 MIR4715-201ENST00000584117 79 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 AC068790.4-201ENST00000602474 263 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 AC007687.1-201ENST00000602704 304 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 AC011468.4-201ENST00000603942 409 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.36□□□□□ -1.71
VRK3Q8IV63 BX664608.1-201ENST00000610519 487 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 AC078899.5-201ENST00000612475 178 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 AL133173.2-201ENST00000614270 90 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.36□□□□□ -1.71
VRK3Q8IV63 C2orf27A-204ENST00000623058 969 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 AC009161.2-201ENST00000624626 138 ntBASIC4.36□□□□□ -1.71
VRK3Q8IV63 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VRK3Q8IV63 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.36□□□□□ -1.71
VRK3Q8IV63 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.36□□□□□ -1.71
VRK3Q8IV63 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.36□□□□□ -1.71
VRK3Q8IV63 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
VRK3Q8IV63 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VRK3Q8IV63 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VRK3Q8IV63 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VRK3Q8IV63 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.36□□□□□ -1.71
VRK3Q8IV63 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.36□□□□□ -1.71
VRK3Q8IV63 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.36□□□□□ -1.71
VRK3Q8IV63 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VRK3Q8IV63 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.35□□□□□ -1.71
VRK3Q8IV63 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
VRK3Q8IV63 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
VRK3Q8IV63 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
VRK3Q8IV63 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VRK3Q8IV63 RNU6-730P-201ENST00000383954 104 ntBASIC4.35□□□□□ -1.71
VRK3Q8IV63 AC068050.1-201ENST00000394891 380 ntBASIC4.35□□□□□ -1.71
VRK3Q8IV63 AL354719.1-201ENST00000406535 843 ntBASIC4.35□□□□□ -1.71
VRK3Q8IV63 RNU6-1068P-201ENST00000410958 103 ntBASIC4.35□□□□□ -1.71
VRK3Q8IV63 RPS7P15-201ENST00000415804 584 ntBASIC4.35□□□□□ -1.71
VRK3Q8IV63 AL353678.1-201ENST00000422735 741 ntBASIC4.35□□□□□ -1.71
VRK3Q8IV63 RPL35AP12-201ENST00000425362 338 ntBASIC4.35□□□□□ -1.71
VRK3Q8IV63 AC018644.1-201ENST00000429934 551 ntBASIC4.35□□□□□ -1.71
VRK3Q8IV63 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.35□□□□□ -1.71
VRK3Q8IV63 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.35□□□□□ -1.71
VRK3Q8IV63 AC024082.2-201ENST00000434771 238 ntBASIC4.35□□□□□ -1.71
VRK3Q8IV63 AC016691.1-201ENST00000441321 413 ntBASIC4.35□□□□□ -1.71
VRK3Q8IV63 CEACAMP9-201ENST00000442990 513 ntBASIC4.35□□□□□ -1.71
VRK3Q8IV63 RPL7L1P1-201ENST00000448259 785 ntBASIC4.35□□□□□ -1.71
VRK3Q8IV63 AC053481.1-201ENST00000467217 306 ntBASIC4.35□□□□□ -1.71
VRK3Q8IV63 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.35□□□□□ -1.71
VRK3Q8IV63 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VRK3Q8IV63 DEFB109F-201ENST00000491870 277 ntBASIC4.35□□□□□ -1.71
VRK3Q8IV63 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.35□□□□□ -1.71
VRK3Q8IV63 TMEM251P1-201ENST00000503717 318 ntBASIC4.35□□□□□ -1.71
VRK3Q8IV63 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.35□□□□□ -1.71
VRK3Q8IV63 AC112206.3-201ENST00000514578 389 ntBASIC4.35□□□□□ -1.71
VRK3Q8IV63 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.35□□□□□ -1.71
VRK3Q8IV63 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.35□□□□□ -1.71
VRK3Q8IV63 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.35□□□□□ -1.71
VRK3Q8IV63 PDCD5P1-201ENST00000543528 309 ntBASIC4.35□□□□□ -1.71
VRK3Q8IV63 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
VRK3Q8IV63 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.35□□□□□ -1.71
VRK3Q8IV63 AC099489.2-201ENST00000574976 260 ntBASIC4.35□□□□□ -1.71
VRK3Q8IV63 MIR4700-201ENST00000578311 74 ntBASIC4.35□□□□□ -1.71
VRK3Q8IV63 AC017100.2-201ENST00000584628 355 ntBASIC4.35□□□□□ -1.71
VRK3Q8IV63 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.35□□□□□ -1.71
VRK3Q8IV63 AC243960.4-201ENST00000600532 288 ntBASIC4.35□□□□□ -1.71
VRK3Q8IV63 AC004853.1-201ENST00000604902 698 ntBASIC4.35□□□□□ -1.71
VRK3Q8IV63 MIR6820-201ENST00000611508 62 ntBASIC4.35□□□□□ -1.71
VRK3Q8IV63 uc_338.5-201ENST00000611839 155 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms