Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 OR5H2-201ENST00000355273 945 ntBASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 AL356967.1-201ENST00000406305 431 ntBASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 PIGPP2-201ENST00000411569 458 ntBASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 RAP1BP1-201ENST00000412709 553 ntBASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 AC092447.6-201ENST00000414578 210 ntBASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 AC004866.2-201ENST00000438285 481 ntBASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 HIGD1AP11-201ENST00000438361 280 ntBASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 RABEPKP1-201ENST00000440529 1026 ntBASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 HSPE1P28-201ENST00000443139 211 ntBASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 RANP8-201ENST00000444720 713 ntBASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 AL606662.1-201ENST00000445763 553 ntBASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 MTND1P31-201ENST00000449206 961 ntBASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 HMGN2P13-201ENST00000476476 274 ntBASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 AC069499.1-201ENST00000489433 509 ntBASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 RPL7P24-201ENST00000493052 752 ntBASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 AC093853.1-201ENST00000515689 483 ntBASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 ERHP1-201ENST00000523006 310 ntBASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 AC090888.2-201ENST00000559765 1144 ntBASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 AC053481.3-201ENST00000577881 843 ntBASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 VN1R92P-201ENST00000598511 928 ntBASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 BDH2P1-201ENST00000602288 736 ntBASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 AC012669.1-201ENST00000603209 283 ntBASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 AC006111.3-201ENST00000622137 383 ntBASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 AC103706.2-201ENST00000638080 240 ntBASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 AL391994.1-201ENST00000254724 282 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 RNA5SP479-201ENST00000364858 117 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 ATP5F1P3-201ENST00000397213 657 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 SNORA3.3-201ENST00000408712 125 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 AC098592.1-201ENST00000419352 333 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 AC019178.2-201ENST00000423595 505 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 AL022400.1-201ENST00000423946 935 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 AL035407.1-201ENST00000429211 571 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 AL590233.1-201ENST00000430017 456 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 ZYG11AP1-201ENST00000430329 837 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 EZH2P1-201ENST00000431167 291 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 RPL7P34-201ENST00000433316 712 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 MTCYBP3-201ENST00000445588 1137 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 Z95327.1-201ENST00000446082 482 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 AL500522.2-201ENST00000448562 343 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 AC005297.2-201ENST00000450430 606 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 VN1R105P-201ENST00000486595 910 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 AL139099.1-201ENST00000497398 403 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 RNU6-1129P-201ENST00000515964 104 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 RNA5SP216-201ENST00000516111 123 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 RNU6-150P-201ENST00000516237 95 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 MIR2114-201ENST00000516645 80 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 RNU6-711P-201ENST00000517255 106 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 AC087369.1-201ENST00000520775 996 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 AC022690.1-201ENST00000526681 550 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 CYCSP30-201ENST00000546447 172 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 ELOCP32-201ENST00000548625 324 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 AC107016.1-201ENST00000550463 337 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms