Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 RNU6-799P-201ENST00000363567 107 ntBASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 RNA5SP387-201ENST00000364226 106 ntBASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 RNU6-837P-201ENST00000391056 108 ntBASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 RAD23BP2-201ENST00000416003 1207 ntBASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 AL513175.2-201ENST00000422071 443 ntBASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 YWHAZP8-201ENST00000436935 731 ntBASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 AL031183.1-201ENST00000457667 207 ntBASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 AP001992.1-205ENST00000462248 379 ntBASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 AP001025.2-201ENST00000490908 477 ntBASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 MTCYBP37-201ENST00000510642 1133 ntBASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 SNORA70.24-201ENST00000517233 118 ntBASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 AC004486.1-201ENST00000546846 233 ntBASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 AL121603.1-201ENST00000553815 142 ntBASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 OR4G1P-201ENST00000588632 938 ntBASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 AC092474.3-201ENST00000603022 568 ntBASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 MIR1264-201ENST00000616374 69 ntBASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 AC095031.1-201ENST00000623685 672 ntBASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 AL356094.1-201ENST00000624663 1212 ntBASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 AL359893.1-201ENST00000447628 1580 ntBASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 MTND4P8-201ENST00000514997 1362 ntBASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.47□□□□□ -2.01
SMARCD3Q6STE5 RNU6-1243P-201ENST00000364028 107 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 Y_RNA.333-201ENST00000365274 102 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 SNORA9-201ENST00000384215 133 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 RNU6-1005P-201ENST00000384519 107 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 MTND4P13-201ENST00000402078 1023 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 BX682237.1-201ENST00000415016 335 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 AL513321.1-201ENST00000441175 761 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 AC007000.2-201ENST00000442564 487 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 AP000705.1-201ENST00000454567 350 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 RPS29P26-201ENST00000477483 171 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 AC090525.1-201ENST00000479116 478 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 AC025768.1-201ENST00000510057 267 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 RNU6-1102P-201ENST00000516149 96 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 RNA5SP341-201ENST00000516261 117 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 RN7SKP96-201ENST00000516948 297 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 AC103833.1-201ENST00000517442 172 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 OR8K2P-201ENST00000524645 927 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 LINC00557-201ENST00000563184 1279 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 MIR3670-2-201ENST00000582974 65 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 MIR4325-201ENST00000583049 90 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 MIR3670-1-201ENST00000584160 65 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 MIR3670-3-201ENST00000584855 65 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 AC125494.3-201ENST00000602759 455 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 AP000787.2-201ENST00000604432 568 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 SUMO2P14-201ENST00000604488 293 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 AC019159.1-201ENST00000605094 187 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 MIR3670-4-201ENST00000612260 65 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 AL162274.2-201ENST00000614406 332 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 AC007275.1-201ENST00000621243 671 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 AC002064.3-201ENST00000623448 346 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 AC090617.9-201ENST00000623751 147 ntBASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
SMARCD3Q6STE5 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms