Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 SNORA31.9-201ENST00000516429 84 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 Y_RNA.702-201ENST00000516843 96 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 AK6P1-201ENST00000540219 478 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 YPEL5P3-201ENST00000547227 352 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 BNIP3P8-201ENST00000597863 560 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 AC068790.5-201ENST00000602741 355 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 AP000907.4-201ENST00000604143 237 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 AC112187.2-201ENST00000604345 283 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 AC008945.2-201ENST00000606056 604 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 AP001506.1-201ENST00000615444 211 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 AL158209.2-201ENST00000619266 216 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 AC015908.5-201ENST00000623289 343 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 CDRT1-208ENST00000630868 794 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 DCAF13P1-201ENST00000495256 1330 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 BDP1P-201ENST00000582658 1990 ntBASIC3.93□□□□□ -1.78
ZNF549Q6P9A3 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 UBE3AP2-201ENST00000429033 2259 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 AL451142.2-201ENST00000429076 2090 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 MAPK10-373ENST00000641983 6772 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 RNU6-777P-201ENST00000364265 104 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 Y_RNA.372-201ENST00000365599 102 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 U8.14-201ENST00000390843 143 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 RNU6-780P-201ENST00000391030 104 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 RNU2-41P-201ENST00000410991 178 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 RN7SKP263-201ENST00000411194 309 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 RNU6-603P-201ENST00000411403 107 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 RPS3AP3-201ENST00000411933 242 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 AC083875.1-201ENST00000419509 405 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 RPS12P5-201ENST00000423449 371 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 AC109583.1-201ENST00000432156 268 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 AL353597.2-202ENST00000434901 373 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 MTCO1P27-201ENST00000448269 226 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 NDUFA5P7-201ENST00000452914 242 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 AC005229.2-201ENST00000456995 399 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 RPS15AP1-201ENST00000457423 391 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 AC097493.1-201ENST00000463958 372 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 RN7SL385P-201ENST00000468873 276 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 AC069499.1-201ENST00000489433 509 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 AC012170.1-201ENST00000495139 359 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 AC021678.1-201ENST00000505195 936 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 NDUFB4P2-201ENST00000509515 391 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 AC026726.1-201ENST00000512859 601 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 RNU6-507P-201ENST00000516045 100 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 OR5AP1P-201ENST00000529730 940 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 AC022878.1-201ENST00000530684 149 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 MIR4697-201ENST00000582977 78 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 AC009977.1-201ENST00000586015 570 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 AC008687.2-201ENST00000597865 520 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 AC112191.3-201ENST00000604371 277 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 AL139286.1-201ENST00000604465 483 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 BCRP9-201ENST00000605312 388 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 MIR6716-201ENST00000613413 80 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 AC131238.1-201ENST00000617135 328 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 AC009704.2-201ENST00000618739 483 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 RMST_9.1-201ENST00000619945 193 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 AC067931.1-201ENST00000624190 671 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 AC231657.1-201ENST00000624313 397 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms