Protein–RNA interactions for Protein: Q16518

RPE65, Retinoid isomerohydrolase, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPE65Q16518 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.93□□□□□ -1.78
RPE65Q16518 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RPE65Q16518 MARK2P15-201ENST00000432204 2186 ntBASIC3.93□□□□□ -1.78
RPE65Q16518 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RPE65Q16518 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RPE65Q16518 MTND5P3-201ENST00000438536 1800 ntBASIC3.93□□□□□ -1.78
RPE65Q16518 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
RPE65Q16518 AP002001.2-201ENST00000529025 1469 ntBASIC3.92□□□□□ -1.78
RPE65Q16518 AC027287.1-201ENST00000553115 1453 ntBASIC3.92□□□□□ -1.78
RPE65Q16518 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.92□□□□□ -1.78
RPE65Q16518 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
RPE65Q16518 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.92□□□□□ -1.78
RPE65Q16518 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.92□□□□□ -1.78
RPE65Q16518 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RPE65Q16518 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RPE65Q16518 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RPE65Q16518 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RPE65Q16518 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
RPE65Q16518 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.92□□□□□ -1.78
RPE65Q16518 RNA5SP388-201ENST00000362584 119 ntBASIC3.92□□□□□ -1.78
RPE65Q16518 RNU6-989P-201ENST00000362756 107 ntBASIC3.92□□□□□ -1.78
RPE65Q16518 RNU6-263P-201ENST00000363811 107 ntBASIC3.92□□□□□ -1.78
RPE65Q16518 U3.15-201ENST00000365398 212 ntBASIC3.92□□□□□ -1.78
RPE65Q16518 RHOT1P2-201ENST00000366423 333 ntBASIC3.92□□□□□ -1.78
RPE65Q16518 RNU4-78P-201ENST00000410940 126 ntBASIC3.92□□□□□ -1.78
RPE65Q16518 MTCO3P41-201ENST00000414801 328 ntBASIC3.92□□□□□ -1.78
RPE65Q16518 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.92□□□□□ -1.78
RPE65Q16518 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.92□□□□□ -1.78
RPE65Q16518 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.92□□□□□ -1.78
RPE65Q16518 DLGAP5P1-201ENST00000430307 464 ntBASIC3.92□□□□□ -1.78
RPE65Q16518 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.92□□□□□ -1.78
RPE65Q16518 AL590365.1-201ENST00000450788 243 ntBASIC3.92□□□□□ -1.78
RPE65Q16518 MTND1P27-201ENST00000451117 902 ntBASIC3.92□□□□□ -1.78
RPE65Q16518 MTCO1P42-201ENST00000457379 726 ntBASIC3.92□□□□□ -1.78
RPE65Q16518 SNORD108-201ENST00000459332 71 ntBASIC3.92□□□□□ -1.78
RPE65Q16518 ST13P14-201ENST00000474095 734 ntBASIC3.92□□□□□ -1.78
RPE65Q16518 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.92□□□□□ -1.78
RPE65Q16518 AC112204.1-201ENST00000502591 103 ntBASIC3.92□□□□□ -1.78
RPE65Q16518 AC079140.3-201ENST00000511111 550 ntBASIC3.92□□□□□ -1.78
RPE65Q16518 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.92□□□□□ -1.78
RPE65Q16518 AC026402.1-201ENST00000513642 170 ntBASIC3.92□□□□□ -1.78
RPE65Q16518 IFITM8P-201ENST00000522529 394 ntBASIC3.92□□□□□ -1.78
RPE65Q16518 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.92□□□□□ -1.78
RPE65Q16518 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.92□□□□□ -1.78
RPE65Q16518 OR5M7P-201ENST00000526140 972 ntBASIC3.92□□□□□ -1.78
RPE65Q16518 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.92□□□□□ -1.78
RPE65Q16518 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.92□□□□□ -1.78
RPE65Q16518 AC007599.1-201ENST00000568688 1174 ntBASIC3.92□□□□□ -1.78
RPE65Q16518 MIR5697-201ENST00000578045 78 ntBASIC3.92□□□□□ -1.78
RPE65Q16518 MIR4286-201ENST00000580651 93 ntBASIC3.92□□□□□ -1.78
RPE65Q16518 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.92□□□□□ -1.78
RPE65Q16518 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.92□□□□□ -1.78
RPE65Q16518 AC004853.1-201ENST00000604902 698 ntBASIC3.92□□□□□ -1.78
RPE65Q16518 RNA5SP108-201ENST00000605921 117 ntBASIC3.92□□□□□ -1.78
RPE65Q16518 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RPE65Q16518 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
RPE65Q16518 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.92□□□□□ -1.78
RPE65Q16518 MIR6500-201ENST00000622700 86 ntBASIC3.92□□□□□ -1.78
RPE65Q16518 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.92□□□□□ -1.78
RPE65Q16518 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
RPE65Q16518 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RPE65Q16518 AC092104.1-201ENST00000497346 1441 ntBASIC3.92□□□□□ -1.78
RPE65Q16518 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.92□□□□□ -1.78
RPE65Q16518 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
RPE65Q16518 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
RPE65Q16518 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
RPE65Q16518 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.92□□□□□ -1.78
RPE65Q16518 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
RPE65Q16518 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
RPE65Q16518 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.91□□□□□ -1.78
RPE65Q16518 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
RPE65Q16518 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
RPE65Q16518 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RPE65Q16518 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.91□□□□□ -1.78
RPE65Q16518 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.91□□□□□ -1.78
RPE65Q16518 Y_RNA.126-201ENST00000363382 111 ntBASIC3.91□□□□□ -1.78
RPE65Q16518 RN7SKP280-201ENST00000364196 304 ntBASIC3.91□□□□□ -1.78
RPE65Q16518 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RPE65Q16518 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.91□□□□□ -1.78
RPE65Q16518 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.91□□□□□ -1.78
RPE65Q16518 RNU6-1207P-201ENST00000384343 107 ntBASIC3.91□□□□□ -1.78
RPE65Q16518 MIR513A2-201ENST00000385249 127 ntBASIC3.91□□□□□ -1.78
RPE65Q16518 RNU6-837P-201ENST00000391056 108 ntBASIC3.91□□□□□ -1.78
RPE65Q16518 AL603766.1-201ENST00000407763 664 ntBASIC3.91□□□□□ -1.78
RPE65Q16518 Y_RNA.598-201ENST00000410480 95 ntBASIC3.91□□□□□ -1.78
RPE65Q16518 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.91□□□□□ -1.78
RPE65Q16518 AC007899.1-201ENST00000412776 775 ntBASIC3.91□□□□□ -1.78
RPE65Q16518 CDK8P2-201ENST00000415020 547 ntBASIC3.91□□□□□ -1.78
RPE65Q16518 AC245052.5-201ENST00000416320 649 ntBASIC3.91□□□□□ -1.78
RPE65Q16518 AC127526.1-201ENST00000417526 366 ntBASIC3.91□□□□□ -1.78
RPE65Q16518 RPL36AP36-201ENST00000418616 301 ntBASIC3.91□□□□□ -1.78
RPE65Q16518 AIMP1P1-201ENST00000418670 937 ntBASIC3.91□□□□□ -1.78
RPE65Q16518 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.91□□□□□ -1.78
RPE65Q16518 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.91□□□□□ -1.78
RPE65Q16518 AL391219.1-201ENST00000422570 483 ntBASIC3.91□□□□□ -1.78
RPE65Q16518 RWDD4P2-201ENST00000426392 563 ntBASIC3.91□□□□□ -1.78
RPE65Q16518 AL356583.2-201ENST00000426536 280 ntBASIC3.91□□□□□ -1.78
RPE65Q16518 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.91□□□□□ -1.78
RPE65Q16518 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.91□□□□□ -1.78
RPE65Q16518 RPL22P17-201ENST00000438729 315 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms